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2019_SCN_bioreactor_t1_biofilm_scaffold_206733

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t1_biofilm_scaffold_206733_1
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..7153)
DNA (7152bp) protein (2384aa)
Dystroglycan-type cadherin-like domain repeat protein n=3 Tax=Geobacter metallireducens RepID=Q39X49_GEOMG
hypothetical protein
Dystroglycan-type cadherin-like domain repeat protein {ECO:0000313|EMBL:ABB31175.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_206733_2
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(7353..9323)
DNA (1971bp) protein (657aa)
endothelin-converting protein 1 (EC:3.4.24.71)
Endothelin-converting enzyme 1 {ECO:0000313|EMBL:ACB77885.1}; EC=3.4.24.71 {ECO:0000313|EMBL:ACB77885.1};; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
Endothelin-converting enzyme 1 n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B2A0D1_OPITP
2019_SCN_bioreactor_t1_biofilm_scaffold_206733_3
Acinetobacter beijerinckii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9436..9948)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Acinetobacter beijerinckii ANC 3835 RepID=N9FH62_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ENW04266.1}; TaxID=1217649 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter beijerinckii ANC 3835.;"
2019_SCN_bioreactor_t1_biofilm_scaffold_206733_4
RBG_16_Aminicenantes_66_30_curated, Aminicenantes, Bacteria

Not on your lists

comp(10079..10927)
DNA (849bp) protein (283aa)
hypothetical protein id=16936385 bin=RBG_16_Aminicenantes_66_30 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Tax=RBG_16_Aminicenantes_66_30_curated
2019_SCN_bioreactor_t1_biofilm_scaffold_206733_5
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(10985..11917)
DNA (933bp) protein (311aa)
2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
2-dehydropantoate 2-reductase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B2A0D2_OPITP
2019_SCN_bioreactor_t1_biofilm_scaffold_206733_6
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(11996..14188)
DNA (2193bp) protein (731aa)
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZRA1_OPITP
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase {ECO:0000313|EMBL:ACB74588.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
short chain dehydrogenase
2019_SCN_bioreactor_t1_biofilm_scaffold_206733_7
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria

Not on your lists

comp(14219..14992)
DNA (774bp) protein (258aa)
Class II aldolase/adducin family protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZTE4_OPITP
aldolase
Aldolase {ECO:0000313|EMBL:AKC82816.1}; TaxID=1637999 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
2019_SCN_bioreactor_t1_biofilm_scaffold_206733_8
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(15194..16303)
DNA (1110bp) protein (370aa)
L-fuculose-phosphate aldolase n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1J0C4_9BACT
aldolase
Aldolase {ECO:0000313|EMBL:AHF89561.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
2019_SCN_bioreactor_t1_biofilm_scaffold_206733_9
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(16333..16632)
DNA (300bp) protein (100aa)
Ethanolamine utilization protein EutN/carboxysome structural protein Ccml n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1J0C3_9BACT
carbon dioxide concentrating mechanism protein CcmL
Carbon dioxide concentrating mechanism protein CcmL {ECO:0000313|EMBL:AHF89560.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
2019_SCN_bioreactor_t1_biofilm_scaffold_206733_10
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(16634..16924)
DNA (291bp) protein (97aa)
Ethanolamine utilization protein EutN/carboxysome structural protein Ccml n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZR94_OPITP
ethanolamine utilization protein EutN/carboxysome structural protein Ccml
Ethanolamine utilization protein EutN/carboxysome structural protein Ccml {ECO:0000313|EMBL:ACB74581.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_206733_11
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(16927..18405)
DNA (1479bp) protein (493aa)
Acetaldehyde dehydrogenase (Acetylating) n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IZR7_9BACT
aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000313|EMBL:AHF89558.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
2019_SCN_bioreactor_t1_biofilm_scaffold_206733_12
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(18412..18726)
DNA (315bp) protein (105aa)
Ethanolamine utilization protein EutN/carboxysome structural protein Ccml n=2 Tax=unclassified Opitutaceae RepID=H1IZR6_9BACT
ethanolamine utilization protein EutN
Ethanolamine utilization protein EutN {ECO:0000313|EMBL:AHF89557.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
2019_SCN_bioreactor_t1_biofilm_scaffold_206733_13
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(18807..19109)
DNA (303bp) protein (101aa)
Microcompartments protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1IZR5_9BACT
carboxysome shell protein
Carboxysome shell protein {ECO:0000313|EMBL:AHF89556.1}; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
2019_SCN_bioreactor_t1_biofilm_scaffold_206733_14
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(19132..20418)
DNA (1287bp) protein (429aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
Acetate kinase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZR90_OPITP
acetate kinase
2019_SCN_bioreactor_t1_biofilm_scaffold_206733_15
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(20420..20707)
DNA (288bp) protein (96aa)
Microcompartments protein n=2 Tax=unclassified Opitutaceae RepID=H1IZR3_9BACT
microcompartments protein
Carbon dioxide concentrating mechanism/carboxysome shell protein {ECO:0000313|EMBL:EIQ00027.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
2019_SCN_bioreactor_t1_biofilm_scaffold_206733_16
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(20748..21020)
DNA (273bp) protein (91aa)
Microcompartments protein n=2 Tax=unclassified Opitutaceae RepID=H1IZR2_9BACT
carboxysome shell protein
Carbon dioxide concentrating mechanism/carboxysome shell protein {ECO:0000313|EMBL:EIQ00028.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
2019_SCN_bioreactor_t1_biofilm_scaffold_206733_17
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(21081..21755)
DNA (675bp) protein (225aa)
Phosphate propanoyltransferase {ECO:0000256|PIRNR:PIRNR010130}; EC=2.3.1.222 {ECO:0000256|PIRNR:PIRNR010130};; TaxID=794903 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
Phosphate propanoyltransferase n=2 Tax=unclassified Opitutaceae RepID=H1IZR1_9BACT
transcriptional regulator
2019_SCN_bioreactor_t1_biofilm_scaffold_206733_18
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(21908..22750)
DNA (843bp) protein (281aa)
pantoate--beta-alanine ligase (EC:6.3.2.1)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
Pantothenate synthetase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B2A0D7_OPITP
2019_SCN_bioreactor_t1_biofilm_scaffold_206733_19
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

22846..24069
DNA (1224bp) protein (408aa)
Aminotransferase class I and II n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B2A0D8_OPITP
L,L-diaminopimelate aminotransferase
Aminotransferase class I and II {ECO:0000313|EMBL:ACB77891.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_206733_20
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

24176..25819
DNA (1644bp) protein (548aa)
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZTH6_OPITP
tartrate/fumarate subfamily Fe-S type hydro-lyase subunit beta
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit {ECO:0000313|EMBL:ACB73921.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_206733_21
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(25927..27183)
DNA (1257bp) protein (419aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZTM1_OPITP
two component, sigma54 specific, Fis family transcriptional regulator
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ACB73969.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_206733_22
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(27235..28413)
DNA (1179bp) protein (393aa)
Type II secretion system protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZTM2_OPITP
type II secretion system protein
Type II secretion system protein {ECO:0000313|EMBL:ACB73970.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_206733_23
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

28903..29361
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZVG5_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB74062.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_206733_24
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(29398..30273)
DNA (876bp) protein (292aa)
Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EUZ3_9BACT
Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin
Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin {ECO:0000313|EMBL:CCW34172.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
2019_SCN_bioreactor_t1_biofilm_scaffold_206733_25
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

30346..31209
DNA (864bp) protein (288aa)
AraC-type DNA-binding domain-containing protein-like protein id=4476231 bin=GWF2_Lentisphaerae_49_21 species=Pedobacter heparinus genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
AraC family transcriptional regulator
Tax=GWF2_Lentisphaerae_49_21_curated
2019_SCN_bioreactor_t1_biofilm_scaffold_206733_26
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(31231..33225)
DNA (1995bp) protein (665aa)
Alpha-L-fucosidase n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AUQ7_9BACT
alpha-amylase
Alpha-L-fucosidase {ECO:0000313|EMBL:EIP98748.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
2019_SCN_bioreactor_t1_biofilm_scaffold_206733_27
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(33373..33762)
DNA (390bp) protein (130aa)
Immunoglobulin I-set domain protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZYP6_OPITP
immunoglobulin I-set domain-containing protein
Immunoglobulin I-set domain protein {ECO:0000313|EMBL:ACB75282.1}; Flags: Precursor;; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
Displaying 27 items

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