name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
2019_SCN_bioreactor_t2_biofilm_scaffold_128622_1
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..136)
|
Transposase (Class IV) n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X2B8_9BRAD
Transposase (Class IV) {ECO:0000313|EMBL:EAQ33621.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
transposase
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_128622_2
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(385..597)
|
PhnA protein n=1 Tax=Methylobacterium sp. 88A RepID=UPI00036F731D
putative PhnA protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_128622_3
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(681..2804)
|
Elongation factor G n=3 Tax=Acidiphilium RepID=EFG_ACICJ
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
elongation factor G
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_128622_4
Tanticharoenia sakaeratensis, Tanticharoenia, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3045..4346
|
Uncharacterized protein-like protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5G101_ACICJ
Uncharacterized protein {ECO:0000313|EMBL:GAN52774.1}; TaxID=1231623 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Tanticharoenia.;" source="Tanticharoenia sakaeratensis NBRC 103193.;"
hypothetical protein
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_128622_5
Acidomonas methanolica, Acidomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4349..5623
|
Uncharacterized protein n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZG79_GLUDA
Uncharacterized protein {ECO:0000313|EMBL:GAJ28693.1}; TaxID=1231351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidomonas.;" source="Acidomonas methanolica NBRC 104435.;"
hypothetical protein
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_128622_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5671..6696)
|
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00037F3880
siaP; TRAP dicarboxylate transporter-DctP subunit
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_128622_7
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6807..8078
|
Amidase, hydantoinase/carbamoylase family {ECO:0000313|EMBL:EFH12705.1}; EC=3.5.-.- {ECO:0000313|EMBL:EFH12705.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
Amidase, hydantoinase/carbamoylase family n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RJ11_9PROT
amidase, hydantoinase/carbamoylase family protein
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_128622_8
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8208..9053
|
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000370F346
Monoxide dehydrogenase {ECO:0000313|EMBL:EKE74781.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
FAD-binding molybdopterin dehydrogenase
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_128622_9
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9065..11758
|
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000366C6F9
Aldehyde oxidase/xanthine dehydrogenase {ECO:0000313|EMBL:EKE74780.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
aldehyde oxidase/xanthine dehydrogenase
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_128622_10
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11755..13179
|
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035CC998
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_128622_11
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13319..14182
|
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037B2F4E
Uncharacterized protein {ECO:0000313|EMBL:EKE74778.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
hypothetical protein
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_128622_12
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14179..14754
|
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003740D07
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAE50283.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_128622_13
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14774..16003
|
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037A4E2B
ABC transporter substrate-binding protein
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:EIG58751.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_128622_14
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16010..17848
|
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002EDD40E
ABC transporter permease {ECO:0000313|EMBL:KJB92228.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
ABC transporter permease
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_128622_15
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17845..18603
|
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002F24B80
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EHL97401.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
livG; branched-chain amino acid ABC transporter ATPase
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_128622_16
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18603..19304
|
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003828866
ABC transporter {ECO:0000313|EMBL:EKE74773.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
ABC transporter
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_128622_17
unknown
|
Not on your lists |
19393..19653
|
This feature has no annotations |
|
2019_SCN_bioreactor_t2_biofilm_scaffold_128622_18
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19885..21144
|
Major facilitator superfamily MFS_1 n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WYQ4_THIK1
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADG32231.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_128622_19
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21151..21543)
|
Rhodanese domain protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T8Y0_MESCW
Rhodanese domain protein {ECO:0000313|EMBL:CDX17870.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
rhodanese domain-containing protein
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_128622_20
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21573..22256)
|
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000366A41E
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EHL96084.1}; Flags: Fragment;; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
acetyltransferase family protein
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_128622_21
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22398..22820
|
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036F1D64
CHRD
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_128622_22
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22947..24140)
|
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00038153AC
Enamidase {ECO:0000313|EMBL:KGM34887.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
metal-dependent hydrolase
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_128622_23
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24274..27726)
|
Uncharacterized protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IUF2_RHOCS
Uncharacterized protein {ECO:0000313|EMBL:GAN77201.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_128622_24
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27762..28241)
|
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000375529E
MarR family transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:EKE77276.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_128622_25
unknown
|
Not on your lists |
comp(28356..28655)
|
This feature has no annotations |
|
2019_SCN_bioreactor_t2_biofilm_scaffold_128622_26
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28902..30614
|
major facilitator transporter n=1 Tax=Burkholderia sp. JPY347 RepID=UPI000363FBFD
major facilitator transporter
General substrate transporter:Major facilitator superfamily {ECO:0000313|EMBL:EAY63800.1}; TaxID=350702 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia PC184.;"
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_128622_27
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30813..32711
|
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036A5758
Acetyl-CoA synthetase {ECO:0000313|EMBL:GAN77206.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
AMP-dependent synthetase and ligase
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_128622_28
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(32741..34297)
|
D-aminopeptidase (EC:3.4.11.19)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0003664BC3
Aminopeptidase {ECO:0000313|EMBL:KGM35215.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_128622_29
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(34344..34889)
|
Molybdenum cofactor biosynthesis protein B n=2 Tax=Acidiphilium RepID=A5G2B4_ACICJ
Molybdenum cofactor biosynthesis protein B {ECO:0000256|PIRNR:PIRNR006443}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
molybdenum cofactor biosynthesis protein B
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_128622_30
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(34903..36807)
|
Soluble lytic murein transglycosylase (EC:3.2.1.-)
Soluble lytic murein transglycosylase {ECO:0000313|EMBL:AHJ63729.1}; EC=3.2.1.- {ECO:0000313|EMBL:AHJ63729.1};; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
Soluble lytic murein transglycosylase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BR03_GRABC
|