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2019_SCN_bioreactor_t2_biofilm_scaffold_231817_3

Organism: 2019_SCN_bioreactor_t2_biofilm_Alphaproteobacteria_70_37

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: 1593..2846

Top 3 Functional Annotations

Value Algorithm Source
soxB; sarcosine oxidase beta subunit (EC:1.5.3.1) similarity KEGG
DB: KEGG
  • Identity: 78.2
  • Coverage: 417.0
  • Bit_score: 679
  • Evalue 5.50e-193
Sarcosine oxidase subunit beta n=1 Tax=Nitratireductor indicus C115 RepID=K2PMY6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 77.5
  • Coverage: 417.0
  • Bit_score: 684
  • Evalue 4.70e-194
Sarcosine oxidase subunit beta {ECO:0000313|EMBL:EKF42442.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 417.0
  • Bit_score: 684
  • Evalue 6.50e-194

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Taxonomy

Nitratireductor indicus → Nitratireductor → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1254
ATGAGCCGCTTCTCCCTCGCCGCGCTGATCCGCCACGCCTTTGCCGGCAACACCGGCTGGCAGCCGCAGTGGCGCGCCGCCGTGCCGAAGCCGGCCTACGACGTGGTGATCGTCGGCGCCGGCGGGCACGGGCTGGCCACCGCCTATTACCTCGCCAGCGAGCACGGGCTGCGCAACATCGCGGTGGTGGAGCGCGGCTGGCTCGGCGGCGGCAACACCGGGCGCAACACCACCATCCTGCGCTCCAACTACCTGTGGCCCGAGAGCCAGGGGCTGTACGAGCATGCCCTGAAACTGTGGGAGGGGCTGTCACGCGCGCTCAACTACAACGTCATGTATTCCCCGCGCGGCGTGATGATGCTGGCGCACAACCACCACGACGTGCAGGTGGCGCGGCGGCATATTCATGCCAACCGCCTGAGCGGCATCGACAACGAGTGGCTGACCCCGGCGCAGGCGAAGGCGTTCTGCCCGCTGCTCAACACCGCCGCGGACATCCGCTACCCGATCCTGGGCGCCGCCTTGCAGCGGCGCGGCGGCACCGCGCGGCACGATGCGGTGGCCTGGGGCTTCGCGCGGGCCGCCAGCGCGCTGGGCGTGGACATCATCGAGAACTGCGAGGTCACCGCCATCACCCGCGACGCGGCGGGCGCGGTGGCGGGGGTGGAGACCACGCGCGGGGCGATCCGGGCGAAGCGCGTTGGCGTGGTCGCGGCCGGGCATACCAGCGTGCTGATGGCCATGGCCGGCGTGCGCATGCCGCTGGAGAGCTTTCCATTGCAGGCGCTGGTGTCCGAGCCGGTGAAGCCGGCCATGCCCTGCGTGGTGATGTCCAACACCATCCACGCCTACATGTCCCAGTCCGACAAGGGCGAGATGGTGATCGGCGCCGGCACCGACGTCTACACCTCGTACAGCCAGGCCGGCGGGCTGCACATCGCCGCCCATACGCTGGAGGCGATCTGCGAGCTGTTCCCCGCCGTGCGGCGGCTGCGCATGCTGCGCAACTGGGCCGGCATCGTCGATGTCACGCCCGACCGCTCGCCGATCATCGGCCTGACGCCTGTGCCCGGGCTGTTCGTCAATTGCGGCTGGGGGACCGGCGGCTTCAAGGCGACGCCGGGGTCCGGCCATGTGTTCGCACACACCATCGCCACCGGCAGCCCGCACCCGATCAACGCCGGCTTCACGCTCGACCGCTTCCGCACCGGCCGGCTGATCGACGAGGCCGCCGCCGCGGCGGTGGCGCATTGA
PROTEIN sequence
Length: 418
MSRFSLAALIRHAFAGNTGWQPQWRAAVPKPAYDVVIVGAGGHGLATAYYLASEHGLRNIAVVERGWLGGGNTGRNTTILRSNYLWPESQGLYEHALKLWEGLSRALNYNVMYSPRGVMMLAHNHHDVQVARRHIHANRLSGIDNEWLTPAQAKAFCPLLNTAADIRYPILGAALQRRGGTARHDAVAWGFARAASALGVDIIENCEVTAITRDAAGAVAGVETTRGAIRAKRVGVVAAGHTSVLMAMAGVRMPLESFPLQALVSEPVKPAMPCVVMSNTIHAYMSQSDKGEMVIGAGTDVYTSYSQAGGLHIAAHTLEAICELFPAVRRLRMLRNWAGIVDVTPDRSPIIGLTPVPGLFVNCGWGTGGFKATPGSGHVFAHTIATGSPHPINAGFTLDRFRTGRLIDEAAAAAVAH*