name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
2019_SCN_bioreactor_t2_biofilm_scaffold_131126_1
Cronobacter malonaticus, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
166..705
|
Putative uncharacterized protein id=4018759 bin=GWA2_Elusimicrobia_69_24 species=Thioalkalivibrio nitratireducens genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
CFSAN001453_contig0040, whole genome shotgun sequence {ECO:0000313|EMBL:KIU60864.1}; TaxID=1128983 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cronobacter.;" source="Cronobacter malonaticus ENBT0334.;"
hypothetical protein
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_131126_2
unknown
|
Not on your lists |
766..1209
|
This feature has no annotations |
|
2019_SCN_bioreactor_t2_biofilm_scaffold_131126_3
Lysobacter sp. ATCC 53042, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1273..1626
|
NIPSNAP family protein n=1 Tax=Lysobacter sp. ATCC 53042 RepID=F8TUH8_9GAMM
NIPSNAP family protein {ECO:0000313|EMBL:AEH59090.1}; TaxID=324869 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. ATCC 53042.;"
hypothetical protein
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_131126_4
Mycobacterium abscessus, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
1675..2094
|
FosJ n=3 Tax=Mycobacterium abscessus subsp. bolletii RepID=I2ALG3_MYCAB
FosI {ECO:0000313|EMBL:AFJ38137.1}; TaxID=1168066 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium abscessus.;" source="Mycobacterium abscessus subsp. bolletii F1725.;"
fosX; fosfomycin resistance protein
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_131126_5
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2372..2728)
|
HTH-type transcriptional regulator glnR n=2 Tax=Xanthomonas campestris pv. translucens RepID=L0T348_XANCT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AER55894.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_131126_6
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2721..3023)
|
Integration host factor subunit alpha n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UDK5_XANAP
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
ihfA; integration host factor subunit alpha
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_131126_7
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3036..5411)
|
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Xanthomonas translucens pv. translucens DSM 18974 RepID=L0T4H2_XANCT
phenylalanyl-tRNA synthetase
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_131126_8
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5421..6431)
|
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UR80_PSEUP
pheS; phenylalanyl-tRNA synthetase subunit alpha
Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_131126_9
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6578..6937)
|
50S ribosomal protein L20 n=1 Tax=Xanthomonas axonopodis RepID=UPI000311C64F
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
rplT; 50S ribosomal protein L20
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_131126_10
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6951..7148)
|
50S ribosomal protein L35 n=24 Tax=Xanthomonas RepID=RL35_XANAC
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
rpmI; probable 50S ribosomal protein L35
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_131126_11
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7469..8020)
|
translation initiation factor IF-3 n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00035EDDA7
Translation initiation factor IF-3 {ECO:0000255|HAMAP-Rule:MF_00080}; TaxID=190485 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 /; NCPPB 528 / LMG 568 / P 25).;"
infC; translation initiation factor IF-3
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_131126_12
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8084..9985)
|
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
Threonine--tRNA ligase id=2598364 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
threonyl-tRNA synthetase
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_131126_13
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10390..12438)
|
excinuclease ABC subunit B n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002DB177E
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=314722 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis.;"
excinuclease ABC subunit B
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_131126_14
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12615..13145
|
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7URA5_PSEUP
Strain LMCP11 contig_28, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ24653.1}; TaxID=339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris.;"
hypothetical protein
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_131126_15
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13372..15261)
|
RecBCD enzyme subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01487};; Exonuclease V subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; Helicase/nuclease RecBCD subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
exodeoxyribonuclease V subunit alpha (EC:3.1.11.5)
Exodeoxyribonuclease V subunit alpha n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7B0_9GAMM
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_131126_16
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15258..18920)
|
Exodeoxyribonuclease V subunit beta n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7B1_9GAMM
ATP-dependent exonuclase V beta subunit, helicase and exonuclease domain-containing
Tax=BJP_08E140C01_Xanthomonadales_64_42
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_131126_17
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18917..22603)
|
DNA helicase/exodeoxyribonuclease V, gamma subunit (EC:3.1.11.5)
Exodeoxyribonuclease V subunit gamma n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W7B2_9GAMM
Tax=BJP_08E140C01_Xanthomonadales_64_42
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_131126_18
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22694..22885)
|
Putative transmembrane protein n=3 Tax=Stenotrophomonas maltophilia RepID=B2FQG2_STRMK
NODE_24, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ98151.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
inner membrane protein YjeT (clustered with HflC)
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_131126_19
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22889..23752)
|
membane protease HflC n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000305F705
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
HflC protein
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_131126_20
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23749..24861)
|
Putative integral membrane protease subunit HflK n=1 Tax=Xanthomonas translucens pv. graminis ART-Xtg29 RepID=K8ZDX2_XANCT
Membrane protein {ECO:0000313|EMBL:KGM55399.1}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
HflK protein
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_131126_21
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24858..26186)
|
GTPase HflX n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WQY6_PSEUU
GTP-binding proten HflX
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_131126_22
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26236..26511)
|
RNA-binding protein Hfq n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003021CF6
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
hfq; RNA-binding protein Hfq
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_131126_23
Lysobacter daejeonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26654..27616)
|
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;"
tRNA delta(2)-isopentenylpyrophosphate transferase n=1 Tax=Xanthomonas sacchari RepID=UPI000262A5C4
tRNA dimethylallyltransferase
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_131126_24
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27625..29064)
|
Amino acid transporter n=1 Tax=Xanthomonas campestris pv. campestris (strain B100) RepID=B0RMK1_XANCB
Amino acid permease {ECO:0000313|EMBL:KHL55375.1}; TaxID=92824 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. cannabis.;"
amino acid transporter
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_131126_25
Arenimonas malthae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29184..30269
|
alkane 1-monooxygenase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B374BA
Uncharacterized protein {ECO:0000313|EMBL:KFN41867.1}; TaxID=1384054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas malthae CC-JY-1.;"
alkane hydroxylase
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_131126_26
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30274..31167)
|
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
dihydropteroate synthase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002DE8B79
dihydropteroate synthase
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_131126_27
Methylobacillus flagellatus, Methylobacillus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31251..33140)
|
membrane protease FtsH catalytic subunit (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=265072 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylobacillus.;" source="Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875).;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1H386_METFK
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_131126_28
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(33166..33906)
|
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
23S rRNA methyltransferase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000316E744
rrmJ; ribosomal RNA large subunit methyltransferase J
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_131126_29
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
33945..34250
|
Putative uncharacterized protein n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0BDQ0_9XANT
RNA-binding protein {ECO:0000313|EMBL:EYR65941.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
putative RNA-binding protein, YhbY family
|
|
2019_SCN_bioreactor_t2_biofilm_scaffold_131126_30
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
34254..34625
|
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B36486
Membrane protein {ECO:0000313|EMBL:KGQ19651.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
hypothetical protein
|