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2019_SCN_bioreactor_t3_planktonic_scaffold_116315

Search features with annotation key words

Displaying items 1-30 of 136 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_planktonic_scaffold_116315_1
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..130
DNA (129bp) protein (43aa)
UPI0003C7867A related cluster n=3 Tax=unknown RepID=UPI0003C7867A
Uncharacterized protein {ECO:0000313|EMBL:EWF67955.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
ISCro4 transposase
2019_SCN_bioreactor_t3_planktonic_scaffold_116315_2
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(207..782)
DNA (576bp) protein (192aa)
Outer membrane lipoprotein n=6 Tax=Klebsiella RepID=G8WJ10_KLEOK
outer membrane lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:EHT10646.1}; TaxID=883125 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca 10-5250.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_116315_3
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(792..1382)
DNA (591bp) protein (197aa)
DnaA initiator-associating protein DiaA n=156 Tax=Bacteria RepID=DIAA_KLEP3
DnaA initiator-associating protein DiaA
DnaA initiator-associating protein DiaA {ECO:0000256|HAMAP-Rule:MF_01157, ECO:0000256|SAAS:SAAS00014432}; TaxID=1432558 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae ISC21.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_116315_4
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1405..1791)
DNA (387bp) protein (129aa)
UPF0102 protein KOX_03560 n=2 Tax=Klebsiella oxytoca RepID=G8WJ08_KLEOK
endonuclease
UPF0102 protein L387_05015 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_116315_5
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1749..3830)
DNA (2082bp) protein (694aa)
Penicillin-binding protein activator LpoA n=2 Tax=Klebsiella oxytoca RepID=G8WJ07_KLEOK
Penicillin-binding protein activator LpoA {ECO:0000256|HAMAP-Rule:MF_01890}; Short=PBP activator LpoA {ECO:0000256|HAMAP-Rule:MF_01890};; Flags: Precursor;; TaxID=1333852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca KONIH1.;"
penicillin-binding protein
2019_SCN_bioreactor_t3_planktonic_scaffold_116315_6
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3894..4754
DNA (861bp) protein (287aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1191061 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca E718.;"
Ribosomal RNA small subunit methyltransferase I n=2 Tax=Klebsiella RepID=H3LDJ4_KLEOX
16S rRNA methyltransferase
2019_SCN_bioreactor_t3_planktonic_scaffold_116315_7
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4789..6678)
DNA (1890bp) protein (630aa)
Uncharacterized protein n=1 Tax=Klebsiella sp. OBRC7 RepID=J6IPT8_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:EWF61547.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
enterotoxin
2019_SCN_bioreactor_t3_planktonic_scaffold_116315_8
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6770..7642)
DNA (873bp) protein (291aa)
D-tagatose-1,6-bisphosphate aldolase subunit KbaY {ECO:0000256|HAMAP-Rule:MF_01293}; Short=TBPA {ECO:0000256|HAMAP-Rule:MF_01293};; Short=TagBP aldolase {ECO:0000256|HAMAP-Rule:MF_01293};; EC=4.1.2.40 {ECO:0000256|HAMAP-Rule:MF_01293};; D-tagatose-bisphosphate aldolase class II {ECO:0000256|HAMAP-Rule:MF_01293}; Ketose 1,6-bisphosphate aldolase class II {ECO:0000256|HAMAP-Rule:MF_01293}; Tagatose-bisphosphate aldolase {ECO:0000256|HAMAP-Rule:MF_01293}; TaxID=883125 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca 10-5250.;"
D-tagatose-1,6-bisphosphate aldolase subunit KbaY n=1 Tax=Klebsiella oxytoca 10-5250 RepID=H3N359_KLEOX
kbaY; tagatose-bisphosphate aldolase
2019_SCN_bioreactor_t3_planktonic_scaffold_116315_9
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7655..8809)
DNA (1155bp) protein (385aa)
Putative tagatose-6-phosphate ketose/aldose isomerase n=1 Tax=Klebsiella oxytoca 10-5250 RepID=H3N358_KLEOX
aldose isomerase
Aldose isomerase {ECO:0000313|EMBL:AID92431.1}; TaxID=1333852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca KONIH1.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_116315_10
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9114..10247)
DNA (1134bp) protein (378aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Klebsiella oxytoca 10-5250 RepID=H3N357_KLEOX
N-acetylglucosamine-6-phosphate deacetylase
2019_SCN_bioreactor_t3_planktonic_scaffold_116315_11
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10244..10678)
DNA (435bp) protein (145aa)
PTS system, mannose/fructose/sorbose family, IIA component n=2 Tax=Klebsiella RepID=H3N356_KLEOX
PTS N-acetylgalactosamine transporter subunit IIA
PTS system, mannose/fructose/sorbose family, IIA component {ECO:0000313|EMBL:EHT10637.1}; TaxID=883125 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca 10-5250.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_116315_12
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10696..11574)
DNA (879bp) protein (293aa)
PTS system, mannose/fructose/sorbose family, IID component n=1 Tax=Klebsiella oxytoca 10-5250 RepID=H3N355_KLEOX
PTS system N-acetylgalactosamine-specific transporter subunit IID
PTS system N-acetylgalactosamine-specific transporter subunit IID {ECO:0000313|EMBL:AID92428.1}; TaxID=1333852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca KONIH1.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_116315_13
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11564..12343)
DNA (780bp) protein (260aa)
PTS system sorbose-specific iic component n=1 Tax=Klebsiella sp. OBRC7 RepID=J4XN91_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:EWF61541.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
PTS system N-acetylgalactosamine-specific transporter subunit IIC
2019_SCN_bioreactor_t3_planktonic_scaffold_116315_14
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12354..12827)
DNA (474bp) protein (158aa)
PTS system, mannose/fructose/sorbose family, IIB component n=1 Tax=Klebsiella oxytoca 10-5250 RepID=H3N353_KLEOX
PTS system N-acetylgalactosamine-specific transporter subunit IIB
PTS system N-acetylgalactosamine-specific transporter subunit IIB {ECO:0000313|EMBL:AID92426.1}; TaxID=1333852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca KONIH1.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_116315_15
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12840..14141)
DNA (1302bp) protein (434aa)
D-tagatose-1,6-bisphosphate aldolase subunit KbaZ n=1 Tax=Klebsiella oxytoca 10-5250 RepID=H3N352_KLEOX
D-tagatose-1,6-bisphosphate aldolase subunit KbaZ {ECO:0000256|HAMAP-Rule:MF_01295}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
tagatose-bisphosphate aldolase
2019_SCN_bioreactor_t3_planktonic_scaffold_116315_16
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14392..15201
DNA (810bp) protein (270aa)
Putative aga operon transcriptional repressor n=1 Tax=Klebsiella oxytoca 10-5250 RepID=H3N351_KLEOX
transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EWF61491.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_116315_17
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15262..16833)
DNA (1572bp) protein (524aa)
garD; galactarate dehydrogenase (EC:4.2.1.42)
D-galactarate dehydratase n=7 Tax=Enterobacteriaceae RepID=H3LU42_KLEOX
D-galactarate dehydratase {ECO:0000313|EMBL:EWF61490.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_116315_18
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17352..18686
DNA (1335bp) protein (445aa)
Putative galactarate transporter n=1 Tax=Klebsiella oxytoca M5al RepID=K6KB58_KLEOX
D-galactarate permease
Putative galactarate transporter {ECO:0000313|EMBL:EKP27458.1}; TaxID=290336 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca M5al.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_116315_19
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18715..19485
DNA (771bp) protein (257aa)
5-keto-4-deoxy-D-glucarate aldolase {ECO:0000256|HAMAP-Rule:MF_01291}; Short=KDGluc aldolase {ECO:0000256|HAMAP-Rule:MF_01291};; Short=KDGlucA {ECO:0000256|HAMAP-Rule:MF_01291};; EC=4.1.2.20 {ECO:0000256|HAMAP-Rule:MF_01291};; 2-dehydro-3-deoxy-D-glucarate aldolase {ECO:0000256|HAMAP-Rule:MF_01291}; 2-keto-3-deoxy-D-glucarate aldolase {ECO:0000256|HAMAP-Rule:MF_01291}; 5-dehydro-4-deoxy-D-glucarate aldolase {ECO:0000256|HAMAP-Rule:MF_01291}; Alpha-keto-beta-deoxy-D-glucarate aldolase {ECO:0000256|HAMAP-Rule:MF_01291}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
5-keto-4-deoxy-D-glucarate aldolase n=2 Tax=Klebsiella oxytoca RepID=H3LU40_KLEOX
alpha-dehydro-beta-deoxy-D-glucarate aldolase
2019_SCN_bioreactor_t3_planktonic_scaffold_116315_20
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19514..20404
DNA (891bp) protein (297aa)
garR; tartronate semialdehyde reductase (EC:1.1.1.60)
Tartronate semialdehyde reductase n=8 Tax=Klebsiella RepID=G8WIY9_KLEOK
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:EWF61487.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_116315_21
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20470..21615
DNA (1146bp) protein (382aa)
Glycerate kinase I n=2 Tax=Klebsiella oxytoca RepID=G8WIY8_KLEOK
Glycerate kinase 2 {ECO:0000313|EMBL:EWF61486.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
glycerate kinase
2019_SCN_bioreactor_t3_planktonic_scaffold_116315_22
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21494..22027)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Klebsiella oxytoca MGH 42 RepID=V3KC18_KLEOX
Uncharacterized protein {ECO:0000313|EMBL:EWF61485.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
hypothetical protein
2019_SCN_bioreactor_t3_planktonic_scaffold_116315_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22359..22556
DNA (198bp) protein (66aa)
Uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=V6PUT1_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EOW02505.1}; TaxID=1182701 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE102.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_116315_24
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22693..24102
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Enterobacter asburiae (strain LF7a) RepID=G2SCC9_ENTAL
Uncharacterized protein {ECO:0000313|EMBL:EWF63098.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
hypothetical protein
2019_SCN_bioreactor_t3_planktonic_scaffold_116315_25
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24095..24502
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Enterobacter sp. MGH 24 RepID=V3PXM7_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:EWF63097.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
hypothetical protein
2019_SCN_bioreactor_t3_planktonic_scaffold_116315_26
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24969..25379
DNA (411bp) protein (137aa)
Periplasmic protein n=3 Tax=cellular organisms RepID=R0KSK5_NOSB1
putative lipoprotein
VirG {ECO:0000313|EMBL:AID92418.1}; TaxID=1333852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca KONIH1.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_116315_27
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25413..25574)
DNA (162bp) protein (54aa)
Uncharacterized protein n=2 Tax=Klebsiella oxytoca RepID=G8WIY6_KLEOK
Uncharacterized protein {ECO:0000313|EMBL:EWF63095.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
hypothetical protein
2019_SCN_bioreactor_t3_planktonic_scaffold_116315_28
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25599..26300)
DNA (702bp) protein (234aa)
Pirin-like protein yhaK n=3 Tax=cellular organisms RepID=R0KR33_NOSB1
pirin
Pirin {ECO:0000313|EMBL:AID92417.1}; TaxID=1333852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca KONIH1.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_116315_29
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26405..27301
DNA (897bp) protein (299aa)
LysR family transcriptional regulator n=2 Tax=Klebsiella oxytoca RepID=G8WIY4_KLEOK
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:AID92416.1}; TaxID=1333852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca KONIH1.;"
2019_SCN_bioreactor_t3_planktonic_scaffold_116315_30
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27338..27706)
DNA (369bp) protein (123aa)
Inner membrane protein YhaH n=9 Tax=Klebsiella RepID=I6W016_KLEOX
inner membrane protein YhaH
Inner membrane protein yhaH {ECO:0000313|EMBL:EWF63092.1}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca MGH 41.;"
Displaying items 1-30 of 136 in total

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