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2019_SCN_bioreactor_t3_biofilm_scaffold_20139

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_biofilm_scaffold_20139_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..82
DNA (81bp) protein (27aa)
Fumarate hydratase class I, aerobic {ECO:0000313|EMBL:GAO54461.1}; EC=4.2.1.2 {ECO:0000313|EMBL:GAO54461.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
fumarate hydratase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B2F39B
2019_SCN_bioreactor_t3_biofilm_scaffold_20139_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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220..2235
DNA (2016bp) protein (672aa)
Histidine kinase internal region n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBY5_NOVAD
Autolysin sensor kinase {ECO:0000313|EMBL:GAO54460.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
histidine kinase
2019_SCN_bioreactor_t3_biofilm_scaffold_20139_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2269..3015
DNA (747bp) protein (249aa)
Transcriptional regulator, LytR/AlgR family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBY4_NOVAD
Two-component response regulator {ECO:0000313|EMBL:GAO54459.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
LytR/AlgR family transcriptional regulator
2019_SCN_bioreactor_t3_biofilm_scaffold_20139_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3035..3340)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CTU7_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:GAO54458.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
2019_SCN_bioreactor_t3_biofilm_scaffold_20139_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3416..4780)
DNA (1365bp) protein (455aa)
Mg chelatase-related protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBP9_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:GAO54457.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Mg chelatase-like protein
2019_SCN_bioreactor_t3_biofilm_scaffold_20139_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4930..6855)
DNA (1926bp) protein (642aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E902_9SPHN
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:GAO54456.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
diguanylate cyclase
Displaying 6 items

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