ggKbase home page

2019_SCN_bioreactor_t3_biofilm_scaffold_11487

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_biofilm_scaffold_11487_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..198)
DNA (198bp) protein (66aa)
amidohydrolase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4A6EB
Uncharacterized protein {ECO:0000313|EMBL:GAO54717.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
amidohydrolase
2019_SCN_bioreactor_t3_biofilm_scaffold_11487_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(549..2687)
DNA (2139bp) protein (713aa)
Quino(Hemo)protein alcohol dehydrogenase, PQQ-dependent {ECO:0000313|EMBL:GAO54715.1}; EC=1.1.2.- {ECO:0000313|EMBL:GAO54715.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein n=1 Tax=Blastomonas sp. AAP53 RepID=UPI0003730705
alcohol dehydrogenase
2019_SCN_bioreactor_t3_biofilm_scaffold_11487_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2745..4310)
DNA (1566bp) protein (522aa)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:GAO54713.1}; EC=6.2.1.3 {ECO:0000313|EMBL:GAO54713.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
AMP-dependent synthetase and ligase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4B6_NOVAD
AMP-dependent synthetase/ligase
2019_SCN_bioreactor_t3_biofilm_scaffold_11487_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4318..5139)
DNA (822bp) protein (274aa)
Glutathione S-transferase-like protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4B5_NOVAD
Glutathione S-transferase {ECO:0000313|EMBL:GAO54712.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
glutathione S-transferase-like protein
2019_SCN_bioreactor_t3_biofilm_scaffold_11487_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5139..5918)
DNA (780bp) protein (260aa)
Glutathione S-transferase-like protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4B4_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:GAO54711.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
glutathione S-transferase-like protein
2019_SCN_bioreactor_t3_biofilm_scaffold_11487_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6204..6902)
DNA (699bp) protein (233aa)
Pirin n=1 Tax=Sphingobium ummariense RL-3 RepID=T0IQM4_9SPHN
Pirin {ECO:0000313|EMBL:GAO54710.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
pirin-related protein
2019_SCN_bioreactor_t3_biofilm_scaffold_11487_7
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7018..7710
DNA (693bp) protein (231aa)
LysR family transcriptional regulator n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003A8188D
Transcriptional regulator of lysR family {ECO:0000313|EMBL:GAO54709.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
LysR family transcriptional regulator
Displaying 7 items

View Taxonomy