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2019_SCN_bioreactor_t3_biofilm_scaffold_126857

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_biofilm_scaffold_126857_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..676
DNA (675bp) protein (225aa)
Secretion protein HlyD family protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XFE1_NOVAD
Membrane fusion component of tripartite multidrug resistance system {ECO:0000313|EMBL:GAO54076.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
secretion protein HlyD family protein
2019_SCN_bioreactor_t3_biofilm_scaffold_126857_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

676..2241
DNA (1566bp) protein (522aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XFE0_NOVAD
Inner membrane component of tripartite multidrug resistance system {ECO:0000313|EMBL:GAO54075.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
EmrB/QacA family drug resistance transporter
2019_SCN_bioreactor_t3_biofilm_scaffold_126857_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2251..2919)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GAW4_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:GAO54074.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
2019_SCN_bioreactor_t3_biofilm_scaffold_126857_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3102..3518
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GAW3_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:GAO54073.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
2019_SCN_bioreactor_t3_biofilm_scaffold_126857_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3522..4874)
DNA (1353bp) protein (451aa)
Glutathione S-transferase {ECO:0000313|EMBL:GAO54072.1}; EC=2.5.1.18 {ECO:0000313|EMBL:GAO54072.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
butyryl-CoA:acetate CoA transferase (EC:2.8.3.8)
succinyl-CoA:3-ketoacid-CoA transferase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B3C23B
2019_SCN_bioreactor_t3_biofilm_scaffold_126857_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4874..5119)
DNA (246bp) protein (82aa)
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A {ECO:0000313|EMBL:GAO54069.1}; EC=2.8.3.5 {ECO:0000313|EMBL:GAO54069.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
3-oxoacid CoA-transferase subunit A (EC:2.8.3.5)
3-oxoacid CoA-transferase, subunit A n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GAV8_NOVAD
2019_SCN_bioreactor_t3_biofilm_scaffold_126857_7
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5551..6423
DNA (873bp) protein (291aa)
Transcriptional regulator, LysR family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GAV7_NOVAD
Transcriptional regulator {ECO:0000313|EMBL:GAO54068.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
LysR family transcriptional regulator
2019_SCN_bioreactor_t3_biofilm_scaffold_126857_8
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6430..7077)
DNA (648bp) protein (216aa)
Epoxide hydrolase N-terminal domain-like phosphatase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GAV6_NOVAD
Hydrolase of haloacid dehalogenase-like family {ECO:0000313|EMBL:GAO54067.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
epoxide hydrolase domain-containing phosphatase
2019_SCN_bioreactor_t3_biofilm_scaffold_126857_9
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7227..8006
DNA (780bp) protein (260aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z635_9SPHN
Universal stress protein uspA and related nucleotide-binding proteins {ECO:0000313|EMBL:GAO54066.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
2019_SCN_bioreactor_t3_biofilm_scaffold_126857_10
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8078..8593
DNA (516bp) protein (172aa)
Membrane protein-like protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GAV4_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:GAO54065.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
2019_SCN_bioreactor_t3_biofilm_scaffold_126857_11
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8995..9750
DNA (756bp) protein (252aa)
ATPase AAA (EC:3.6.4.6)
AAA family ATPase, CDC48 subfamily n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GAV3_NOVAD
Cell division protein ftsH {ECO:0000313|EMBL:GAO54063.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Displaying 11 items

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