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2019_SCN_bioreactor_t3_biofilm_scaffold_126979

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_biofilm_scaffold_126979_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..365)
DNA (363bp) protein (121aa)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
ribonuclease E (EC:3.1.4.-)
Ribonuclease E n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5W8_NOVAD
2019_SCN_bioreactor_t3_biofilm_scaffold_126979_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1022..1897
DNA (876bp) protein (292aa)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:GAO55446.1}; EC=3.5.1.28 {ECO:0000313|EMBL:GAO55446.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
cell wall hydrolase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B547CD
2019_SCN_bioreactor_t3_biofilm_scaffold_126979_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1950..2702
DNA (753bp) protein (251aa)
Multimodular transpeptidase-transglycosylase {ECO:0000313|EMBL:GAO55447.1}; EC=2.4.1.129 {ECO:0000313|EMBL:GAO55447.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Peptidoglycan glycosyltransferase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5X0_NOVAD
2019_SCN_bioreactor_t3_biofilm_scaffold_126979_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2699..4468
DNA (1770bp) protein (590aa)
Multimodular transpeptidase-transglycosylase {ECO:0000313|EMBL:GAO55447.1}; EC=2.4.1.129 {ECO:0000313|EMBL:GAO55447.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
peptidoglycan glycosyltransferase (EC:2.4.1.129)
penicillin-binding protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4FD16
2019_SCN_bioreactor_t3_biofilm_scaffold_126979_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4557..5105
DNA (549bp) protein (183aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5X1_NOVAD
Alkyl hydroperoxide reductase subunit C-like protein {ECO:0000313|EMBL:GAO55448.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen
Displaying 5 items

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