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2019_SCN_bioreactor_t3_biofilm_scaffold_67073

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_biofilm_scaffold_67073_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..1144)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri MF28 RepID=U3HQN7_PSEST
HDIG domain protein {ECO:0000313|EMBL:GAO56291.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
metal dependent phosphohydrolase
2019_SCN_bioreactor_t3_biofilm_scaffold_67073_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1481..2920)
DNA (1440bp) protein (480aa)
AMP nucleosidase {ECO:0000256|HAMAP-Rule:MF_01932}; EC=3.2.2.4 {ECO:0000256|HAMAP-Rule:MF_01932};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
AMP nucleosidase (EC:3.2.2.4)
AMP nucleosidase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8G6_NOVAD
2019_SCN_bioreactor_t3_biofilm_scaffold_67073_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3027..3599
DNA (573bp) protein (191aa)
UPI0003D61639 related cluster n=1 Tax=unknown RepID=UPI0003D61639
Rare lipoprotein A {ECO:0000313|EMBL:GAO56289.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
rare lipoprotein A
2019_SCN_bioreactor_t3_biofilm_scaffold_67073_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3658..4251)
DNA (594bp) protein (198aa)
50S ribosomal protein L9 n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZDC3_9SPHN
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
rplI; 50S ribosomal protein L9
2019_SCN_bioreactor_t3_biofilm_scaffold_67073_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4264..4488)
DNA (225bp) protein (75aa)
30S ribosomal protein S18 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=RS18_NOVAD
rpsR; 30S ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
2019_SCN_bioreactor_t3_biofilm_scaffold_67073_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4492..4854)
DNA (363bp) protein (121aa)
30S ribosomal protein S6 n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B7A861
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
rpsF; 30S ribosomal protein S6
2019_SCN_bioreactor_t3_biofilm_scaffold_67073_7
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5066..5401
DNA (336bp) protein (112aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:GAO56285.1}; EC=4.2.1.17 {ECO:0000313|EMBL:GAO56285.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
enoyl-CoA hydratase (EC:4.2.1.17)
Short chain enoyl-CoA hydratase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8G2_NOVAD
Displaying 7 items

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