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2019_SCN_bioreactor_t3_biofilm_scaffold_157781

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_biofilm_scaffold_157781_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..568)
DNA (567bp) protein (189aa)
5-methyltetrahydrofolate--homocysteine methyltransferase {ECO:0000313|EMBL:GAO54010.1}; EC=2.1.1.13 {ECO:0000313|EMBL:GAO54010.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
methionine synthase (B12-dependent) (EC:2.1.1.13)
Methionine synthase (B12-dependent) n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3D1_NOVAD
2019_SCN_bioreactor_t3_biofilm_scaffold_157781_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(565..1506)
DNA (942bp) protein (314aa)
5,10-methylenetetrahydrofolate reductase {ECO:0000313|EMBL:GAO54011.1}; EC=1.5.1.20 {ECO:0000313|EMBL:GAO54011.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
Methylenetetrahydrofolate reductase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3D0_NOVAD
2019_SCN_bioreactor_t3_biofilm_scaffold_157781_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1503..2558)
DNA (1056bp) protein (352aa)
ArsR family transcriptional regulator n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZCK8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO54012.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
ArsR family transcriptional regulator
2019_SCN_bioreactor_t3_biofilm_scaffold_157781_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2748..3047
DNA (300bp) protein (100aa)
hypothetical protein, partial n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B57F76
Uncharacterized protein {ECO:0000313|EMBL:GAO54013.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
2019_SCN_bioreactor_t3_biofilm_scaffold_157781_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3157..3420
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Sphingopyxis baekryungensis RepID=UPI0003B46335
Uncharacterized protein {ECO:0000313|EMBL:GAO54014.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
2019_SCN_bioreactor_t3_biofilm_scaffold_157781_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3371..4120)
DNA (750bp) protein (250aa)
Transcriptional regulator, IclR family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G902_NOVAD
Transcriptional regulator of iclR family {ECO:0000313|EMBL:GAO54015.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
IclR family transcriptional regulator
2019_SCN_bioreactor_t3_biofilm_scaffold_157781_7
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4221..4538
DNA (318bp) protein (106aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G903_NOVAD
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:GAO54016.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
short-chain dehydrogenase/reductase SDR
Displaying 7 items

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