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2019_SCN_bioreactor_t3_biofilm_scaffold_144092

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_biofilm_scaffold_144092_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..934)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5Q5_NOVAD
PE family protein {ECO:0000313|EMBL:GAO55383.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
2019_SCN_bioreactor_t3_biofilm_scaffold_144092_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(970..4335)
DNA (3366bp) protein (1122aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5Q5_NOVAD
PE family protein {ECO:0000313|EMBL:GAO55383.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
2019_SCN_bioreactor_t3_biofilm_scaffold_144092_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4350..6017)
DNA (1668bp) protein (556aa)
Hemolysin activation/secretion protein-like protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5Q4_NOVAD
Hemolysin activation/secretion protein associated with vreARI signalling system {ECO:0000313|EMBL:GAO55382.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hemolysin activation/secretion protein-like protein
2019_SCN_bioreactor_t3_biofilm_scaffold_144092_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6134..6961)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5Q3_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:GAO55381.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
2019_SCN_bioreactor_t3_biofilm_scaffold_144092_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6958..7725)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5Q2_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:GAO55380.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
2019_SCN_bioreactor_t3_biofilm_scaffold_144092_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7712..9757)
DNA (2046bp) protein (682aa)
Adenylate cyclase {ECO:0000313|EMBL:GAO55379.1}; EC=4.6.1.1 {ECO:0000313|EMBL:GAO55379.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Adenylate/guanylate cyclase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5Q1_NOVAD
guanylate cyclase
2019_SCN_bioreactor_t3_biofilm_scaffold_144092_7
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9762..11621)
DNA (1860bp) protein (620aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5Q0_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:GAO55378.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
2019_SCN_bioreactor_t3_biofilm_scaffold_144092_8
unknown

Not on your lists

11656..13032
DNA (1377bp) protein (459aa)

This feature has no annotations

2019_SCN_bioreactor_t3_biofilm_scaffold_144092_9
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13158..13862)
DNA (705bp) protein (235aa)
NADH dehydrogenase {ECO:0000313|EMBL:GAO55377.1}; EC=1.6.99.3 {ECO:0000313|EMBL:GAO55377.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Nitroreductase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5P9_NOVAD
nitroreductase
2019_SCN_bioreactor_t3_biofilm_scaffold_144092_10
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13894..15711)
DNA (1818bp) protein (606aa)
Aerobic cobaltochelatase cobT subunit {ECO:0000313|EMBL:GAO55376.1}; EC=6.6.1.2 {ECO:0000313|EMBL:GAO55376.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
cobalt chelatase, pCobT subunit (EC:6.6.1.2)
Cobaltochelatase CobT subunit n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5P8_NOVAD
2019_SCN_bioreactor_t3_biofilm_scaffold_144092_11
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15775..16122)
DNA (348bp) protein (116aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
translaldolase (EC:2.2.1.2)
Probable transaldolase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=TAL_NOVAD
2019_SCN_bioreactor_t3_biofilm_scaffold_144092_12
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16155..16481)
DNA (327bp) protein (109aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
translaldolase (EC:2.2.1.2)
Probable transaldolase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=TAL_NOVAD
2019_SCN_bioreactor_t3_biofilm_scaffold_144092_13
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16608..18776
DNA (2169bp) protein (723aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Primosomal protein N n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5P4_NOVAD
primosome assembly protein PriA
2019_SCN_bioreactor_t3_biofilm_scaffold_144092_14
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18875..20407
DNA (1533bp) protein (511aa)
Uncharacterized protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQT3_SPHAL
Uncharacterized protein {ECO:0000313|EMBL:GAO55373.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
2019_SCN_bioreactor_t3_biofilm_scaffold_144092_15
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20465..20941)
DNA (477bp) protein (159aa)
AraC family transcriptional regulator n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B2EA8E
Uncharacterized protein {ECO:0000313|EMBL:GAO55372.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
6-O-methylguanine DNA methyltransferase
Displaying 15 items

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