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2019_SCN_bioreactor_t3_biofilm_scaffold_228400

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_biofilm_scaffold_228400_1
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(54..1097)
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FEV5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EXL09486.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
acetyltransferase protein
2019_SCN_bioreactor_t3_biofilm_scaffold_228400_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1456..1734
DNA (279bp) protein (93aa)
Metal-dependent protease n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7J3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO55310.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
PAD1/JAB1 superfamily metal-dependent protease
2019_SCN_bioreactor_t3_biofilm_scaffold_228400_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1893..2534
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3T8_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:GAO55308.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
2019_SCN_bioreactor_t3_biofilm_scaffold_228400_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2554..3258
DNA (705bp) protein (235aa)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:GAO55307.1}; EC=3.5.1.28 {ECO:0000313|EMBL:GAO55307.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Negative regulator of AmpC, AmpD n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3T7_NOVAD
negative regulator of AmpC, AmpD
2019_SCN_bioreactor_t3_biofilm_scaffold_228400_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3746..4705
DNA (960bp) protein (320aa)
Cation diffusion facilitator family transporter n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3T6_NOVAD
Cobalt-zinc-cadmium resistance protein czcD {ECO:0000313|EMBL:GAO55305.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
cation diffusion facilitator family transporter
2019_SCN_bioreactor_t3_biofilm_scaffold_228400_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4793..5347)
DNA (555bp) protein (185aa)
ATP-dependent protease n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B60CEE
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
clpX; ATP-dependent protease ATP-binding subunit ClpX
Displaying 6 items

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