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2019_SCN_bioreactor_t3_biofilm_scaffold_187071

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_biofilm_scaffold_187071_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..897)
DNA (897bp) protein (299aa)
excinuclease ABC subunit B n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B43993
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
excinuclease ABC subunit B
2019_SCN_bioreactor_t3_biofilm_scaffold_187071_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1072..1641
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4K8_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:GAO53751.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
2019_SCN_bioreactor_t3_biofilm_scaffold_187071_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1786..2598
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI0002D46926
Uncharacterized protein {ECO:0000313|EMBL:GAO53750.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
2019_SCN_bioreactor_t3_biofilm_scaffold_187071_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2623..4725)
DNA (2103bp) protein (701aa)
Molybdopterin dinucleotide-binding region n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4L1_NOVAD
Anaerobic dehydrogenases, typically selenocysteine-containing {ECO:0000313|EMBL:GAO53749.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
molydopterin dinucleotide-binding region
2019_SCN_bioreactor_t3_biofilm_scaffold_187071_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4934..6376
DNA (1443bp) protein (481aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4L2_NOVAD
Protein containing domains DUF404, DUF407 {ECO:0000313|EMBL:GAO53748.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
2019_SCN_bioreactor_t3_biofilm_scaffold_187071_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6425..7345
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4L3_NOVAD
Protein containing domains DUF403 {ECO:0000313|EMBL:GAO53747.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
Displaying 6 items

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