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2019_SCN_bioreactor_t3_biofilm_scaffold_205164

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_biofilm_scaffold_205164_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..448)
DNA (447bp) protein (149aa)
MotA/TolQ/ExbB proton channel n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z5A5_9SPHN
MotA/tolQ/exbB proton channel family protein {ECO:0000313|EMBL:GAO54131.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
MotA/TolQ/ExbB proton channel
2019_SCN_bioreactor_t3_biofilm_scaffold_205164_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(538..1203)
DNA (666bp) protein (222aa)
Outer membrane transport energization protein TonB n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GCE4_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:GAO54132.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
TonB-like protein
2019_SCN_bioreactor_t3_biofilm_scaffold_205164_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1555..2424
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B7A0F9
Uncharacterized protein {ECO:0000313|EMBL:GAO54133.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
2019_SCN_bioreactor_t3_biofilm_scaffold_205164_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2474..2908
DNA (435bp) protein (145aa)
Putative thioesterase protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N645_ERYLH
4-hydroxybenzoyl-CoA thioesterase family active site {ECO:0000313|EMBL:GAO54134.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
thioesterase protein
2019_SCN_bioreactor_t3_biofilm_scaffold_205164_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2941..4266
DNA (1326bp) protein (442aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GCE2_NOVAD
2019_SCN_bioreactor_t3_biofilm_scaffold_205164_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4286..4684)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GCE1_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:GAO54136.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
Displaying 6 items

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