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2019_SCN_bioreactor_t3_biofilm_scaffold_290762

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
2019_SCN_bioreactor_t3_biofilm_scaffold_290762_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..245)
DNA (243bp) protein (81aa)
Membrane-like protein n=2 Tax=Novosphingobium nitrogenifigens RepID=F1ZDK7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO54952.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
2019_SCN_bioreactor_t3_biofilm_scaffold_290762_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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453..992
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WDK4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO54951.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
2019_SCN_bioreactor_t3_biofilm_scaffold_290762_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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982..2310
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3M0_NOVAD
Gene transfer agent terminase protein {ECO:0000313|EMBL:GAO54950.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
2019_SCN_bioreactor_t3_biofilm_scaffold_290762_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2335..3510
DNA (1176bp) protein (392aa)
Phage portal protein, HK97 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3L9_NOVAD
Gene transfer agent portal protein {ECO:0000313|EMBL:GAO54949.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Phage portal protein, HK97
2019_SCN_bioreactor_t3_biofilm_scaffold_290762_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3510..3815
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3L8_NOVAD
Gene transfer agent associated protein Sala_2001 {ECO:0000313|EMBL:GAO54948.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
2019_SCN_bioreactor_t3_biofilm_scaffold_290762_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3812..4231
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3L7_NOVAD
Gene transfer agent prohead protease {ECO:0000313|EMBL:GAO54947.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
prohead peptidase
2019_SCN_bioreactor_t3_biofilm_scaffold_290762_7
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4313..5467
DNA (1155bp) protein (385aa)
Phage major capsid protein, HK97 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3L6_NOVAD
Phage major capsid protein {ECO:0000313|EMBL:GAO54946.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
phage major capsid protein, HK97
2019_SCN_bioreactor_t3_biofilm_scaffold_290762_8
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5601..6161
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3L5_NOVAD
Gene transfer agent (GTA) ORFG06 {ECO:0000313|EMBL:GAO54945.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
2019_SCN_bioreactor_t3_biofilm_scaffold_290762_9
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6320..6664
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3L4_NOVAD
Gene transfer agent (GTA) ORFG08 {ECO:0000313|EMBL:GAO54943.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
Displaying 9 items

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