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2019_SCN_bioreactor_t3_biofilm_scaffold_5458_4

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(4498..6168)

Top 3 Functional Annotations

Value Algorithm Source
amidohydrolase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5C8AB similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 555.0
  • Bit_score: 998
  • Evalue 1.90e-288
Exoenzymes regulatory protein aepA in lipid-linked oligosaccharide synthesis cluster {ECO:0000313|EMBL:GAO53637.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 556.0
  • Bit_score: 1112
  • Evalue 0.0
putative TIM-barrel fold metal-dependent hydrolase similarity KEGG
DB: KEGG
  • Identity: 68.9
  • Coverage: 559.0
  • Bit_score: 791
  • Evalue 1.00e-226

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1671
ATGGTCACGCGCCGCGCGTTCGTATCGGGTTCGCTCAACGCCATCGTCGCGGCGGCCGTGCCGGCGCGGGTCTGGGCCGCCACGCGCGGCGGGGTGGAAGTGGCCTACGTCAATGCGGCGGTGTGGACGGGAACGGGGCCGGACGTGCGCACCGACGCCATCGGCGTGGCCGGCGGGCATATCGTCGCCATCGGCAAGGATGCGGTGCGCGCCGCGTCCAGCCCGCGCACGCAGGTCATCGACCTGCAAGGCGCGTTCGTGACACCGGGGCTGATCGATTGCCATACCCATTTCACCATCGGGTCGATGGCGCTGTCGCAGCCCTCGCTGCGCGATGCGGCGACGCCCGACGCATTCGTGCAGCGGATCGCGCAGGCCGCGCGCGCGCTGCCCAAGGGCGAATGGCTGGAAGGCGGCAACTGGGATCAGGACCGCTGGGGCGGCAAGATGCCCACGCGCCAGTGGATCGACGCGGTGACGCCCGATACGCCCGTGGCGGTGATCCGCTATGACCTCCACATGATCCTGTGCAATTCGCTGGCGCTGAAGCTGGCGGGGATCGATCGCAACACGGCCGACGTGCCGGGCGGCGTGATCCTGCGCGACGAGAACGGGGAGCCGACCGGCATCGTCAAGGACGCCGCCAAGGATCTCGTCCTGCGCGCGATCGCGAAGCCGAGCGAGGCCCGGCTGGACGCCGCCCTGCGGCAGGGTATCGCGCTGGGCCTGAGCAAGGGCGTGACCGAAGTCCACGTGCCCGAACTCGACTGGTCCACATTCGAGAACACCCGCCGCCTGCGCGCGCAAGGCGAAACGGGGATGCGCTTCTACAACTTCACCCCGCTGAAGGACTGGGAACGGCAGGCCGCCATCGTCGCGCAGGAAGGGCGCGGCGATGACTGGGTGCGCTGGGGCGGGTGCAAGGTGGTGTTCGACGGCTCGCTCGGTTCGCGCACCGCGCTGATGTATCTGCCCTATCTCGACGAACCGCACGCGCACGGCATCATGGTGACCGATCCCAAGGATCTGAAGGCCTGGATGACCGGCGCGGACAAGGCCGGGCTGCAGGTGACCGCCCACGCCATCGGCGACGAGGCGAACGACATCGTGCTGGACACGATGGCGGCGGTTACCACAGCCAACGGCGCGCGCGACCGGCGCTTCCGCGTCGAACATGCGCAGCACTTGCGCGAGGAAGCGATCGGGCGGTTCGCCAAACAGGGCGTGATCGCCTCGATGCAGCCCTACCACGCGATCGACGACGGACGCTGGGCGGTGCGGCGCGTCGGACCCGAACGGCTGCGCACCAGCTTCGCGGTCGGGTCCATGGTGCGCTCGGGCGCGCATGTCTGCTTCGGTTCGGACTGGCCGGTGGCTCCGCTCGATCCGCTGACCGGCATCTACGCGGCGGTGACGCGCGAGACGATCGACGGGCTCAACCCGCACGGCTGGTATCCCGAACAGCGCATCACGATGGCCCAGGCACTGCGGGGCTATACCCGCGAAGCGGCCTACGCGGGCCGGGTGGAACGGCAGCGCGGCGCGATCATGCCCGGAATGCAGGCCGATTTCGCGGTGTTCGACCGCGACCTGTTCCGGATCGACCCGGAAACGATTCCCCAGACCAAGGTCCTGCGCACCGTGGTGGGCGGCACGCAGCGCTTCGGGTAG
PROTEIN sequence
Length: 557
MVTRRAFVSGSLNAIVAAAVPARVWAATRGGVEVAYVNAAVWTGTGPDVRTDAIGVAGGHIVAIGKDAVRAASSPRTQVIDLQGAFVTPGLIDCHTHFTIGSMALSQPSLRDAATPDAFVQRIAQAARALPKGEWLEGGNWDQDRWGGKMPTRQWIDAVTPDTPVAVIRYDLHMILCNSLALKLAGIDRNTADVPGGVILRDENGEPTGIVKDAAKDLVLRAIAKPSEARLDAALRQGIALGLSKGVTEVHVPELDWSTFENTRRLRAQGETGMRFYNFTPLKDWERQAAIVAQEGRGDDWVRWGGCKVVFDGSLGSRTALMYLPYLDEPHAHGIMVTDPKDLKAWMTGADKAGLQVTAHAIGDEANDIVLDTMAAVTTANGARDRRFRVEHAQHLREEAIGRFAKQGVIASMQPYHAIDDGRWAVRRVGPERLRTSFAVGSMVRSGAHVCFGSDWPVAPLDPLTGIYAAVTRETIDGLNPHGWYPEQRITMAQALRGYTREAAYAGRVERQRGAIMPGMQADFAVFDRDLFRIDPETIPQTKVLRTVVGGTQRFG*