name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
2019_SCN_bioreactor_t3_biofilm_scaffold_5458_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1..3120
|
amidohydrolase n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036E6702
TolB protein {ECO:0000313|EMBL:GAO53640.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
amidohydrolase family protein
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_5458_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3117..4223
|
peptidase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B60A76
Uncharacterized protein {ECO:0000313|EMBL:GAO53639.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
transporter
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_5458_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4220..4378
|
membrane protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5DC5C
Uncharacterized protein {ECO:0000313|EMBL:GAO53638.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_5458_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4498..6168)
|
amidohydrolase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5C8AB
Exoenzymes regulatory protein aepA in lipid-linked oligosaccharide synthesis cluster {ECO:0000313|EMBL:GAO53637.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
putative TIM-barrel fold metal-dependent hydrolase
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_5458_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6264..6575)
|
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00036D4290
Transcriptional regulator of arsR family {ECO:0000313|EMBL:GAO53636.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
ArsR family transcriptional regulator
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_5458_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6572..9796)
|
multidrug transporter AcrB n=1 Tax=Sphingobium xenophagum RepID=UPI00035E5FFF
Cobalt-zinc-cadmium resistance protein czcA {ECO:0000313|EMBL:GAO53635.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
acriflavin resistance protein
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_5458_7
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9796..10857)
|
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00035C83BB
RND efflux membrane fusion protein {ECO:0000313|EMBL:GAO53634.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
RND family efflux transporter MFP subunit
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_5458_8
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11047..12327
|
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Sphingobium xenophagum RepID=UPI0003640F47
FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:GAO53633.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_5458_9
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12340..12543
|
Uncharacterized protein n=1 Tax=Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 / CB 48) RepID=E8RRE8_ASTEC
Rhodanese-related sulfurtransferase {ECO:0000313|EMBL:GAO53632.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_5458_10
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12556..13851
|
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00035DCF1A
Type I secretion outer membrane protein, tolC {ECO:0000313|EMBL:GAO53631.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
TolC family type I secretion outer membrane protein
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_5458_11
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13921..15129)
|
NADH dehydrogenase {ECO:0000313|EMBL:GAO53630.1}; EC=1.6.99.3 {ECO:0000313|EMBL:GAO53630.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IDB8_BEII9
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_5458_12
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15290..15832)
|
Transcriptional regulator, BadM/Rrf2 family n=5 Tax=Serratia RepID=G0BCX7_SERSA
Uncharacterized protein {ECO:0000313|EMBL:GAO53629.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
transcriptional regulator
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_5458_13
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15913..16707)
|
amidohydrolase n=1 Tax=Sphingomonas wittichii RepID=UPI000374DB7B
Exoenzymes regulatory protein aepA {ECO:0000313|EMBL:GAO53628.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
amidohydrolase 3
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_5458_14
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16746..17405)
|
Amidohydrolase 3 n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V802_SPHWW
Exoenzymes regulatory protein aepA {ECO:0000313|EMBL:GAO53628.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
amidohydrolase 3
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_5458_15
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17476..19629)
|
hypothetical protein n=1 Tax=Dasania marina RepID=UPI0003776F35
Uncharacterized protein {ECO:0000313|EMBL:GAO53627.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
TonB-dependent receptor
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_5458_16
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19817..20914
|
Regulatory protein, LuxR n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V801_SPHWW
Transcriptional regulatory protein {ECO:0000313|EMBL:GAO53626.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
regulatory protein LuxR
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_5458_17
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21062..21622
|
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XFF8_NOVAD
Succinyl-CoA synthetase, alpha subunit {ECO:0000313|EMBL:GAO53625.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_5458_18
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21723..22673
|
Putative Fis family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IK37_9SPHN
Transcriptional regulator {ECO:0000313|EMBL:GAO53624.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
putative Fis family transcriptional regulator
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_5458_19
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22837..24363
|
Aldehyde dehydrogenase {ECO:0000313|EMBL:GAO53623.1}; EC=1.2.1.3 {ECO:0000313|EMBL:GAO53623.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Aldehyde dehydrogenase family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WVD8_9SPHN
NAD-dependent aldehyde dehydrogenase
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_5458_20
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24431..25462
|
Alcohol dehydrogenase {ECO:0000313|EMBL:GAO53622.1}; EC=1.1.1.1 {ECO:0000313|EMBL:GAO53622.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Alcohol dehydrogenase GroES-like domain protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WVD9_9SPHN
adh; Zn-dependent alcohol dehydrogenase
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_5458_21
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25866..26210)
|
Uncharacterized protein {ECO:0000313|EMBL:KKC25631.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_5458_22
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26479..28995
|
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034681A6
Uncharacterized protein {ECO:0000313|EMBL:GAO53620.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
TonB-dependent receptor
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_5458_23
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29064..30308
|
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003468AC3
Uncharacterized protein {ECO:0000313|EMBL:GAO53619.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_5458_24
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30320..31507
|
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002F7573B
Uncharacterized protein {ECO:0000313|EMBL:GAO53618.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_5458_25
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31716..34040)
|
TonB-dependent receptor n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VE81_SPHWW
Uncharacterized protein {ECO:0000313|EMBL:GAO53617.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
TonB-dependent receptor
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_5458_26
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(34320..35873)
|
Aldehyde dehydrogenase {ECO:0000313|EMBL:GAO53616.1}; EC=1.2.1.3 {ECO:0000313|EMBL:GAO53616.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
aldehyde dehydrogenase (acceptor) (EC:1.2.99.3)
Aldehyde dehydrogenase (Acceptor) n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XFF9_NOVAD
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_5458_27
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
36148..37134
|
Transcriptional regulator, AraC family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XFG0_NOVAD
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:GAO53615.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
AraC family transcriptional regulator
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_5458_28
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
37226..37612
|
ArsR family transcriptional regulator n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI000316DE62
ArsR family transcriptional regulator {ECO:0000313|EMBL:KHK91612.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
ArsR family transcriptional regulator
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_5458_29
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
37609..38682
|
Arsenical-resistance protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XEG4_NOVAD
arsenical-resistance protein
Arsenical-resistance protein {ECO:0000313|EMBL:ABP64325.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_5458_30
Sphingomonas sp. KA1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
38699..39127
|
Arsenate reductase {ECO:0000256|RuleBase:RU362029}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=164608 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. KA1.;"
Putative arsenate reductase n=1 Tax=Sphingomonas sp. KA1 RepID=Q0KJB8_9SPHN
arsenate reductase
|