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2019_SCN_bioreactor_t3_biofilm_scaffold_5458_22

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 26479..28995

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034681A6 similarity UNIREF
DB: UNIREF100
  • Identity: 38.8
  • Coverage: 843.0
  • Bit_score: 546
  • Evalue 4.00e-152
Uncharacterized protein {ECO:0000313|EMBL:GAO53620.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 822.0
  • Bit_score: 1619
  • Evalue 0.0
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 38.2
  • Coverage: 855.0
  • Bit_score: 530
  • Evalue 4.90e-148

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2517
ATGCAGAAATATTGGGGGGTACAGGTGACCGGATTTACGCGACGCGGCGGGGGCAAGCCCGCGTTCCATCAGGTTTCGGTACTGGCCATCGGCTTGAGCCTGGCTTTGGTCGCAACGTCGGCCCGCGCGGCGGAGGGGCCGCCTGCCGCCGGGGAAACGGCGACCCAGGGGCTCGATGAAATCGTGGTGACCGCGCAGAAGCGCGAGGAACGGCTGCAGGACGTGCCGGTCAGCGTGGTTGCGGTCAGTTCGGCCAAGATCAACGAACTGCACGCGATCAGCCTGGGCTCGCTGGCCGCCTTCACGCCGGGGCTGGTGGTGGACGACAGCTCGGTCACGCAGCCGCGCTTCACCATTCGCGGCGTGGCGACCGACGATTTCGGCATCGGCACCGAACCCGCCGTGGCGGTTTTCGTCGACGGCATCTACACCGCGCGGACCGGCTCGGCGCTGATCTTCTTCAACGATATCGAGCGCGTGGAAGTGCTGAAGGGGCCGCAAGGCACGATCTTCGGGCGCAATACCTCCGCCGGCGCGATCTCGATCGTCACCAAGAAACCGGAAGACCGCTTCACCACCACCGCCAATTTCGATTTCGGCAACTATGGCTCGAAGCGCATCGAGGCGATGATCAACGTGCCGCTGACGCATACCCTGCAGGTGCGCGGCGACGTGCTGATCAACCGGCGCGACGGCTGGCTGCACGATGCCGTCACGGGCAAGGGCCGGGGCTTCATCCACACCACGTCGGGCCGCATTTCCGCCCGCTGGACGCCCGACAGCGCGACCGACGTGGTCTTCGCCTGGGATCATGACGAAACGCGCAACGATGGCCCGGTGGCGATCGGCATCAGCCAGGTGGCGCTGTCGCGCGATCCGTTCGGGCCGTTCACCAACGACGTGGTCGGCGGCGCGCGCGAAACGCGCCTGCTCAACGGCTATGCGCTGACCATCAACCGCGACATCACCGACGGGCTGAAGCTGACCAGCATCAGTTCGTACCGCCGCTTCTCGACCTCGAACCGCGAGGACGAGGACGGCACCAACGATCCCACGCGCTATCTCGACACCGACAATATCGAGAGCAACACGAGCTTCTATCAGGAACTGCGCCTTTCGCACGATGGCGAAAAGCTGCACTGGCTGATGGGCGGCAGCTATTTCAACGAGGTCGGCCACCAGACCAGCGCGGTGACGGCGCTGGTCGATTCGATCGATTTCGCGCTGTCGAGCGGCGGCTTGCCGCTGTTCAGCGCTTTCGCCGGCGCCGGCCTGCCGGTGTTCGGCAACACCTGGCGCGAGGACATGACCAACACCGCGCGCAACAAGTCCTTCGCCGCGTTCGGCGACGTGACCTGGGACGTGACCGACAAGTGGAGCCTGCGCTTCGGCCTGCGCTATACCAACGACCGCAAGACCTTCACCTGGTTCGCGCCCAGCGTGCAATCGCCGGGCCTGTCGGCGATCCAGTTGCCGGGCGCGGTGTTCAACGCGGGCTTCGACCAGCTCGGCCTGCCGCCGCTGTTCGATCCGGCGACCACCTATTCGGTGCTGCAGGTCTATCAGACGCTCGCTGCCCAGCCGTTCCTGGCGGGTGCGCCGATTTACCCCACGGGCAACCTGATCTTCAACGAAGGCGCGTTGCAGAACGTGCCGTTCACGCGCAAGGCCAGCTTCAACGACGTCTCGCCGCGCTTCGTCGTCAGCTACAAGTTCACGCCCGATGTCATGGCCTACGTTTCCGCCTCGCGCGGGTACAAGGCGGGCGGCTTCAACTCGCAGGCGATCAACAGCTACTTCCGCCCGGAAACCGTGTGGAACTTCGAAGCCGGCGTGAAGTCGGAATTCTTCGACCGGCGGCTGCGCTTCAACCTGACCGGCTATTATTTCCGCTACAACGATCGCCAGTCGATCTCGCTGGTGCAGAACGGCAGCACCATTCCGCAATACGTTACCACCACCGGCAGTTCGAAAGCCTATGGCTTCGATCTCGATACGGCGCTGAAGATCAACGACTACCTGAGCCTGTCGGGCACCCTTTCCTGGATCGATTCCACCTGGGCGAGCCGTATCGAGCAGGTGCAGACCTTCAGCGGGCCGATCAATCTCAACCTCAACGGACAGCCGACCGGCGAGCCGCGCCTCAGCAGCACGTTCGGCGCGCACGCCACCGTGCCGGTCGGCTTCGGCAAGCTCTTTGCCGATTTCAACTGGAGCCACCGTTCGCGCGCCCGCACCAACGCGCGCACGCCCTATGACGACGCGCTCGATACCGTGCTGGGCGGGGTGGACTGGACGAAGCTCGGCACGCTGCGGTCCTCGCGCGATCTGGTCAACGCCCGCATCGGCGGCAAGAGCGCCAACGAACGCGTGACCGTGACCTTCTGGGTCGAGAACCTGTTCAACAAGCAGTACATGAACGGCATCAACAACATCACCACGACCACGTTCGGCACGCCCTACACGCGGATTTCGCCGCCGCGTTTCTTCGGCGGCAGCGTGGCGCTCAAGTATTGA
PROTEIN sequence
Length: 839
MQKYWGVQVTGFTRRGGGKPAFHQVSVLAIGLSLALVATSARAAEGPPAAGETATQGLDEIVVTAQKREERLQDVPVSVVAVSSAKINELHAISLGSLAAFTPGLVVDDSSVTQPRFTIRGVATDDFGIGTEPAVAVFVDGIYTARTGSALIFFNDIERVEVLKGPQGTIFGRNTSAGAISIVTKKPEDRFTTTANFDFGNYGSKRIEAMINVPLTHTLQVRGDVLINRRDGWLHDAVTGKGRGFIHTTSGRISARWTPDSATDVVFAWDHDETRNDGPVAIGISQVALSRDPFGPFTNDVVGGARETRLLNGYALTINRDITDGLKLTSISSYRRFSTSNREDEDGTNDPTRYLDTDNIESNTSFYQELRLSHDGEKLHWLMGGSYFNEVGHQTSAVTALVDSIDFALSSGGLPLFSAFAGAGLPVFGNTWREDMTNTARNKSFAAFGDVTWDVTDKWSLRFGLRYTNDRKTFTWFAPSVQSPGLSAIQLPGAVFNAGFDQLGLPPLFDPATTYSVLQVYQTLAAQPFLAGAPIYPTGNLIFNEGALQNVPFTRKASFNDVSPRFVVSYKFTPDVMAYVSASRGYKAGGFNSQAINSYFRPETVWNFEAGVKSEFFDRRLRFNLTGYYFRYNDRQSISLVQNGSTIPQYVTTTGSSKAYGFDLDTALKINDYLSLSGTLSWIDSTWASRIEQVQTFSGPINLNLNGQPTGEPRLSSTFGAHATVPVGFGKLFADFNWSHRSRARTNARTPYDDALDTVLGGVDWTKLGTLRSSRDLVNARIGGKSANERVTVTFWVENLFNKQYMNGINNITTTTFGTPYTRISPPRFFGGSVALKY*