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2019_SCN_bioreactor_t3_biofilm_scaffold_5458_12

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(15290..15832)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, BadM/Rrf2 family n=5 Tax=Serratia RepID=G0BCX7_SERSA similarity UNIREF
DB: UNIREF100
  • Identity: 79.3
  • Coverage: 179.0
  • Bit_score: 284
  • Evalue 4.60e-74
Uncharacterized protein {ECO:0000313|EMBL:GAO53629.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.3
  • Coverage: 180.0
  • Bit_score: 356
  • Evalue 1.30e-95
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 79.3
  • Coverage: 179.0
  • Bit_score: 284
  • Evalue 1.30e-74

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGGCACATATCACCACCAGCGTCGAATACGGCATCCATTGCCTGCTGCTGCTCGTCGGCAACGAAGACCGGCCGATGAGCAGCCGCGATCTTGCCGAATTGCAGGGCGTTTCCGCCAGCTTCCTCGCCAAGATCTTCCCGAAGCTGGAAAAGGCCGGGATCGTGAAGGCCAGCGAGGGCGTGCGCGGCGGCTACCTGCTGGCGCGGCCGGCCGATGCGATCACCTTCCTCGATATCGTCGACGCCATCGAGGGCGCCAAGCCGCTGTTCGACTGCCAGGAAGTGCGCGGCCGCTGCGCCGTGTTCGGCGGCGATGCGCCCGGCTGGGCATTGGACGGCGTCTGCGCGATCCACGCGGTGATGCTGCAGGCGGAAAAGGCCATGCGCGATGCGCTGGCCGCGCAGACGCTGGGCGCCATCGCCGGGCGCTTCGGCCGCAAGGCTCCACCCGAATTCTTTTCCGAAGTCAGCACCTGGATCGACGGACGCCTGACCGGCCGCACCGCGAAGAGCGGCAGGCCGGCGCGCGACGTGCCGGACTAA
PROTEIN sequence
Length: 181
MAHITTSVEYGIHCLLLLVGNEDRPMSSRDLAELQGVSASFLAKIFPKLEKAGIVKASEGVRGGYLLARPADAITFLDIVDAIEGAKPLFDCQEVRGRCAVFGGDAPGWALDGVCAIHAVMLQAEKAMRDALAAQTLGAIAGRFGRKAPPEFFSEVSTWIDGRLTGRTAKSGRPARDVPD*