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2019_SCN_bioreactor_t3_biofilm_scaffold_5458_6

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(6572..9796)

Top 3 Functional Annotations

Value Algorithm Source
multidrug transporter AcrB n=1 Tax=Sphingobium xenophagum RepID=UPI00035E5FFF similarity UNIREF
DB: UNIREF100
  • Identity: 90.7
  • Coverage: 1074.0
  • Bit_score: 1880
  • Evalue 0.0
Cobalt-zinc-cadmium resistance protein czcA {ECO:0000313|EMBL:GAO53635.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 1074.0
  • Bit_score: 2039
  • Evalue 0.0
acriflavin resistance protein similarity KEGG
DB: KEGG
  • Identity: 77.4
  • Coverage: 1069.0
  • Bit_score: 1623
  • Evalue 0.0

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3225
ATGAACCTGGGCATTTCCGGCAGGCTGACGCGCGCCACGATCCAGTCGCCGCTCACCCCCCTGTTCCTGCTTGCCGCGATCATCGTCGGCCTCATCGCCACGATCACGATCCCGCGCGAAGAGGAGCCGCAGATCAAGGTGCCGATGGTCGACATCATGGTCCAGGCGCCGGGGCTATCGGCCTCGCAGGCGGTGGAACTGGTGGCCAAGCCGCTGGAAACGATCGTCAAGAGCGTGGACGGCGTGGAGCACGTCTATACCCAGGCGCAGGACAACGGCGTGATGGTCACGGCGCGCTTCCTTGTCGGCTCCAATCCCGAAGATGCCGCGATCCGCATCAACGAGAAGATCGAGGCCAACAAGGATCGCATTCCCGTGGGCATTCCCGCGCCGCAAGTGACGGTGCGCGGGATCAACGACGTGCCCATCGTGGTGCTGACCCTGACGCCGAAGCCCGGCGCCGCCGGCCAATGGGACGATCAGGCGCTGGCCGAACTGGCCGGCAAGCTCAGGACCGAGGTCGCCAAGGTCGATGACGTCGGCCTTACCTTCATCACCGGCGGGCAGCGCATGGCGCTGCGCGTGATCCCCGATCCGGCCAGGCTGGCGCTCTACCGCGTGCCTCTGGGCAACCTGATCGAAGCCGTTTCGCAGGCGAACCGCGCCTTCCCCGCGGGCACTGTGCGCGAAGGCGGATCGGCCGCGCTGGTCGTGGCGGGGCAGACGCTCCGCGATGCGCAGGAGCTTTCCGCGCTGACCGTCCGCTCGGCGACAGGCGCCCCGGTCCTGCTGGGCGACGTGGCGCGCGTGGAACAGACGCCGACGCAGGACCAGGCCCGTTCCTGGCGCTGGGCCAGGGCCGACACCAAGGACGGGAAAGGCGTCTGGTCGATGGCCCCCGCCGTCAGCCTTGCCGTCGCCAAGCGGGCGGGCGCCAACGCGGTGACCGTGTCCGAACAGGTGGTGCAACGCATCGATACGCTCAAGGGCACGCTGATCCCGGCTGGCGTCGATGTAGCCGTCACGCGCAATTACGGCGAAACCGCCAACGAAAAGGCCAACGAGCTGATCTTCCACCTCGCCCTGGCCACGGTATCGATCGTCATCCTGATCGGCTTCGCGATCGGGTGGCGCGAAGCCGGCGTGACGGCGATCGTCATCCCCACGACGATCATGCTGACCATGTTCGCCTCGAACGTGATGGGCTTCACGATCAACCGCGTCAGCCTGTTCGCCCTGATCTTCTCGATCGGCATTCTGGTCGACGACGCGATCGTCATGATCGAGAACATCGCCCGGCACTGGGGCATGCACGACGGCCGCGACCGCATCACCGCCGCGGTCGAGGCGGTCGCCGAAGTCGGCAACCCGACGGTCATCGCCACGCTGACCGTCGTTGCCGCGCTTTTGCCGATGCTGTTCGTGTCGGGCCTGATGGGGCCGTACATGGCGCCGATCCCGATCAACGCCTCCGCCGCGATGATCTTCTCGTTCTTCGTCGCCGTCATCATCGCGCCCTGGCTGATGATCCGCTTCGCGCGCCAGACGCTGTCGCAGGGGCACGGGGACGAACACGGGGGCAAGCTGGGCGCGCTCTACAAGCGTTATGCCGCCCGCGTCATCGCCACGCCGCAAAGCGCCAAGCGCTTCCTGATCGGCGTGGGCGTGGCCACCCTCGTCGCCTGCTCGATGTTCTACTTCAAGGCCGTGACCGTGAAGCTGCTGCCCTTCGACAACAAGAGCGAGGTCCAGCTCGTTGCCGACCTGCCCGAAGGCACCAGCCTGGAAATGACGTCGCGCGTGCTGGAACAGGCGGCGGCCGTGGCGCGCGGCGTGCCCGAAGTCGTGTCGATGGAAGCCTATGCCGGCACGTCCGCGCCGTTCAACTTCAACGGGCTGGTGCGGCACTACTTCCTGCGCAACCAGCCCGAAATGGGCGACCTGATGGTCACGCTTCTGCCCAAGGGCGACCGCTCGCGCTCAAGCCACGAGATCGCGGTGGCGCTGCGCGAGAAGCTCCGGGCCATTCCCCTGCCGGCGGGCGGATCGCTCAAGGTGGTCGAAACGCCGCCGGGGCCGCCGGTGCTCGCCACCTTGCTCGCCGAAATCTACGGCCCCGACGAGGCAACGCGGCAAAAGACGGCGAAGCAGGTGGAGGCGATCTTCCGGTCGGTGCCCTATATCGTCGATGTCGACAACAGCTTCGGCGCGCCCCGGCCCACGCTGAAACTGATCCCTGACCGCGCGAAGCTCGATCACTATGGCCTGTCCGAACGCCAGCTCTTTGACAGCATCGGGGCACTGCTGGGGACGCAGGTCGTCGGCTACGCTCCCCGCGCGGCCGATCACGATCCCTTGCCCATCGAGCTCTCGCTCGATCAATCGCAACGGTCATGGTCGTCGGCACTGGCGGCAACCCCCGTCGCGACGACACCGACCGGGCAGTTGATCGCGCTGGGTGAACTGGTCACCGCGAAGATGGTGCCGGGCGAACAGGCGATATTCCGGCGCGACGGGCGCGGGGCAACGATGGTCACGGCCGAACTCGCCGGGCGCTACGAAGCGCCGATCTACGGCATGCTGGCGGTTGACGACGCCATCGACAGCTTCGACTGGAAGGCGCACGGCCTGACCAGGCCCGAAGTCATCCTGCACGGCCAGCCCGAGGACGAAAGCAGGCCGTCGCTGCTGTGGGACGGCGAATGGGAAATCACCTGGGTGACCTTCCGCGACATGGGCGGGGCGTTCATGGTCGCGCTGCTGGGCATCTACGTGCTGGTCGTGGGCCAGTTCCGCAGCTTCACGATCCCGCTGGTCATCCTGACCCCGATCCCGCTGACTCTGGTCGGCATCGTGCTTGGCCACCTGCTGTTCCGGGCGCCGTTCACCGCCACGTCGATGATCGGCTTCATTGCGCGGGCCGGCATCATCGTGCGCAATTCGATCCTGCTCGTCGATTTCATCCGGCACACCCGATCACCGGGCAAGAGCCTGCGCCAGACCTTGCTGGAGGCCGGGATGATCCGCTTCAAGCCGATCGTGCTGACGGCGGCCGCGGCCATGATCGGCGCTTCGGTGATCCTGACCGATCCGATCTTCCAGGGCCTCGCCATCTCGCTGCTGTTCGGGCTGGCCTCCTCGACCCTGCTCACCGTCCTCGTGATTCCCGCGATCTACATCGTCCTGCGCGATGACGGCCATCCTCTGGCGGAGTCTCCATCATGA
PROTEIN sequence
Length: 1075
MNLGISGRLTRATIQSPLTPLFLLAAIIVGLIATITIPREEEPQIKVPMVDIMVQAPGLSASQAVELVAKPLETIVKSVDGVEHVYTQAQDNGVMVTARFLVGSNPEDAAIRINEKIEANKDRIPVGIPAPQVTVRGINDVPIVVLTLTPKPGAAGQWDDQALAELAGKLRTEVAKVDDVGLTFITGGQRMALRVIPDPARLALYRVPLGNLIEAVSQANRAFPAGTVREGGSAALVVAGQTLRDAQELSALTVRSATGAPVLLGDVARVEQTPTQDQARSWRWARADTKDGKGVWSMAPAVSLAVAKRAGANAVTVSEQVVQRIDTLKGTLIPAGVDVAVTRNYGETANEKANELIFHLALATVSIVILIGFAIGWREAGVTAIVIPTTIMLTMFASNVMGFTINRVSLFALIFSIGILVDDAIVMIENIARHWGMHDGRDRITAAVEAVAEVGNPTVIATLTVVAALLPMLFVSGLMGPYMAPIPINASAAMIFSFFVAVIIAPWLMIRFARQTLSQGHGDEHGGKLGALYKRYAARVIATPQSAKRFLIGVGVATLVACSMFYFKAVTVKLLPFDNKSEVQLVADLPEGTSLEMTSRVLEQAAAVARGVPEVVSMEAYAGTSAPFNFNGLVRHYFLRNQPEMGDLMVTLLPKGDRSRSSHEIAVALREKLRAIPLPAGGSLKVVETPPGPPVLATLLAEIYGPDEATRQKTAKQVEAIFRSVPYIVDVDNSFGAPRPTLKLIPDRAKLDHYGLSERQLFDSIGALLGTQVVGYAPRAADHDPLPIELSLDQSQRSWSSALAATPVATTPTGQLIALGELVTAKMVPGEQAIFRRDGRGATMVTAELAGRYEAPIYGMLAVDDAIDSFDWKAHGLTRPEVILHGQPEDESRPSLLWDGEWEITWVTFRDMGGAFMVALLGIYVLVVGQFRSFTIPLVILTPIPLTLVGIVLGHLLFRAPFTATSMIGFIARAGIIVRNSILLVDFIRHTRSPGKSLRQTLLEAGMIRFKPIVLTAAAAMIGASVILTDPIFQGLAISLLFGLASSTLLTVLVIPAIYIVLRDDGHPLAESPS*