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2019_SCN_bioreactor_t3_biofilm_scaffold_5458_25

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(31716..34040)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VE81_SPHWW similarity UNIREF
DB: UNIREF100
  • Identity: 42.6
  • Coverage: 777.0
  • Bit_score: 580
  • Evalue 1.80e-162
Uncharacterized protein {ECO:0000313|EMBL:GAO53617.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 762.0
  • Bit_score: 1493
  • Evalue 0.0
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 777.0
  • Bit_score: 580
  • Evalue 5.00e-163

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2325
ATGACACCGGGAAATCACCGACACATCGGCCGCACGATCGCGGCCGGACTGCTGGCCGCAACCGCGCTTTCCTTCGGCGGCATCGCCCATGCCGAGGAAACGACGCCCGGCACTTCCGCCAGCACCGGCCTTGAGGAAATCACCGTCACCGCGCGCAAGCGCAAGGAATCGCTTCAGGAAACGCCGATCGCGATTTCCGCCTTCTCCGGCAACGCGCTGGAACAGCGGCAGGTCAGCTCGGTAACCGGGCTGGACCGGGTGGTGCCCAACCTTGTCGTCAGCGAGACGGCGCCGGTCGGCGGCAGCAGCGCGGCCGCCTCGTTCTTCATCCGTGGCATCGGCCAGACGGATTTCAACCAGAACACCGAACCGGGCGTGGGCATCTATGTCGACGGCGTCTATATCGCGCGTTCGGTCGGATCGGCGTTGCAGCTGGTGGACCTCGAGAACCTCGAAGTGCTGCGCGGGCCGCAGGGCACGCTGTTCGGCCGCAACACCATCGGCGGCGCGATCAACATCACCACCAAGAAGCCCGGCACGGAACTGGGCGGCACCGCTTCCGTCACCGGCGGATCGGACCACCTGCTCCAGTTCAAGGCGACGCTCGACGCGCCGATCACCGACCGCATCCTGACCAAGCTGACCGTGTTCTCGCGCAACCGCGACGGCTATGTCACGCGCACGAGCGACGGCGTCGATCTGGGCAACGACAACAAGTTCGCCATTCGCGGCGATGTCCGCCTGCTGCCGACCGACACGCTGACCATCGACGCCTCGATCGAACGGATGCGCGAACGCGAACACGGCGCGCCGCTGCAACTGATCGCGGCCTATGCCGACGCGCCCTTCGCCCAGTACAACAACCTGGCGCTTAACGGCGCCGTCTGCGCCACCACGCCCACGGCCGCGCCGTGCTACGGCTCGCAATGGATCGCGCCGGCCGGCAAGGATTACGGCACCGGCCGCGTCGTTTCCAACATCGACGTGCTGGGCGTGAACGTGACCGCCAACTGGAAAGCCCCCGAACCGATCCTGGGCAGCGAGATCGCGGTCAAGTCGATCACCGCGTGGCGCAAGCTGGATTCGATCTTCGGCGCCGATCACGATCACAGCCCGGTGCTGATCGACCACACCTTCAACGATTATTCGCAGCGCCAGTTCTCGCAGGAACTCCAGGTCACCGGCTCGTCCAAGCTGCTGAACTGGGCGGCGGGCGTCTATTACTTCCGCGAAAGCGGCACCGACGCCAACACCGTGGACTTCTCGATCGGCAGCCTGCTGAGCGGTGGCGCGATCCGCAACCGCAGCCTGGCCTTCTATGGGCAGGCGACGCTGAACATCACGCAGGCCCTGTCGATCACCGGCGGCATCCGCCATACCGACGAAGACAAGCTGTTCCTGCCCAACCAGGTCTATCTGACCGACTTCGTCGCCAGCGCGACGCAGATCCTGCCGGCGGGCACGCCGCAGGTGCTGCCGGGCGCGACCGGCAAGCTCAAAGTCAACGAAACCAACTTCCTCGCCAATATCTCGTACAAGTTCACGCGCGATATCATGGCCTATTTCAACTATTCGGACGGCTTCAAATCGGGCGGCTTCACCCAGCGCCTCGCCGGCCCGCCATTCATCTCGCCCCCCTCGTTTTCGCCGGAATACGTCAAGGTCTACGAGGCCGGCATCAAGAGCGAACTGTTCGACCGGCGCGTGCGCCTGAACCTTGCCGCGTTCCAGACCGACTACAAGGACATCCAGCTCAACGTCCTCTCGCCCGGCCTGCCCAACCCGTTCACGATGAACGCCGCCAAGGCCCGCATCCGCGGGTTCGAAGGCGAACTGAACACGCGGATCGGCGGCGGCTGGGCGTTCAACGCCTCGGTGGGCTACCTCGACGCGAAGTATCTCGCGGCGAGCGGCGGCATCATCCTGCACACCGTGGCGGGTGACATCCCGGTCGGCACCGGGCTGGTCAACGTGAACAGCAAGTTCGTGAACGCCCCGAAATGGACGGCTTCGGTGGGCCTTGCCTACACCGCCGAAACCGCCATCGGGAAGTTCTCGCCGCGCGTGGACTGGGCCTATCGCAGCGACGTGTTCCTCGATGCGCTGAACACCCCGCTGCTCCACCAGCCCGGCTATGGCCTGTGGAACGGCACCGTGAGCTATACCGACACGGCGGAAAACTGGACGGTGAGTGTGGGCGCGAAGAACATCTTCAACAAGCGCTTCCTGGTCGCTGGCTATGCCGACGTGGGCGCCTCGGGCTTCGTCGAAGGCGTCTACAACCGTGGCCGCGAATGGCAGATCGAGGTGCGGCGCAAGTTCTGA
PROTEIN sequence
Length: 775
MTPGNHRHIGRTIAAGLLAATALSFGGIAHAEETTPGTSASTGLEEITVTARKRKESLQETPIAISAFSGNALEQRQVSSVTGLDRVVPNLVVSETAPVGGSSAAASFFIRGIGQTDFNQNTEPGVGIYVDGVYIARSVGSALQLVDLENLEVLRGPQGTLFGRNTIGGAINITTKKPGTELGGTASVTGGSDHLLQFKATLDAPITDRILTKLTVFSRNRDGYVTRTSDGVDLGNDNKFAIRGDVRLLPTDTLTIDASIERMREREHGAPLQLIAAYADAPFAQYNNLALNGAVCATTPTAAPCYGSQWIAPAGKDYGTGRVVSNIDVLGVNVTANWKAPEPILGSEIAVKSITAWRKLDSIFGADHDHSPVLIDHTFNDYSQRQFSQELQVTGSSKLLNWAAGVYYFRESGTDANTVDFSIGSLLSGGAIRNRSLAFYGQATLNITQALSITGGIRHTDEDKLFLPNQVYLTDFVASATQILPAGTPQVLPGATGKLKVNETNFLANISYKFTRDIMAYFNYSDGFKSGGFTQRLAGPPFISPPSFSPEYVKVYEAGIKSELFDRRVRLNLAAFQTDYKDIQLNVLSPGLPNPFTMNAAKARIRGFEGELNTRIGGGWAFNASVGYLDAKYLAASGGIILHTVAGDIPVGTGLVNVNSKFVNAPKWTASVGLAYTAETAIGKFSPRVDWAYRSDVFLDALNTPLLHQPGYGLWNGTVSYTDTAENWTVSVGAKNIFNKRFLVAGYADVGASGFVEGVYNRGREWQIEVRRKF*