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2019_SCN_bioreactor_t3_biofilm_scaffold_5458_18

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 21723..22673

Top 3 Functional Annotations

Value Algorithm Source
Putative Fis family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IK37_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 82.8
  • Coverage: 314.0
  • Bit_score: 520
  • Evalue 1.20e-144
Transcriptional regulator {ECO:0000313|EMBL:GAO53624.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.8
  • Coverage: 316.0
  • Bit_score: 610
  • Evalue 1.20e-171
putative Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 82.8
  • Coverage: 314.0
  • Bit_score: 520
  • Evalue 3.30e-145

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 951
GTGGTGGCCGCTCGACACAGCGACACGGTTCTGGACGTGGTGCGGTCCCCCAGCGCGGCCGCCTCTTCGGCGATCGCCGCGTCATGGTGCAGGTCCGTCCTCTTCCATGGACTTGATCCCGACCAGCACGCGGCGCGCGAGCGAGTCGACGGCGCGTCCCTGTCGGCCTTGCGGGCCGAACATGAGATCATGCTCACCGTGGCCGCGCCGGTGCTCGATCAGATGTTCCGTTCGGTCGGGCGTTCGGGTTGCGCGGTGATCCTCAGCGATGCGCGCGGTGTGGTGCTGGAGCGCCGGACGAACGATGCGGACGCCGATTCCTTCACCGCGGCGGGTCTGGTACAGGGCGCGCGCTGGGGCGAGGCGGAGGAAGGCACCAACGGCATCGGCACCTGTCTTTACGAAGACCAGCCCGTGATCGTTCACCGCGATCAGCATTTCGCCGGGCGCAATGTCGATATCAGCTGCATGGACGCGCCGGTGCATGATCCGCATGGCCGGCTGGCGGGGGCGCTCGACGTATCGAGCTGCCGTGACGATCACGGCCCGGCGATGGCGGAAATGATCGCCGCGCTGGTGCGCGACGCCGCGCGCAAGATCGAGCGGGACTATTTCTGCCGTCACTTCGATGGCCACCGCATCGTGTTCCTGTCCGACGATGCCACCACCGGCACCGCGCTGCTGGCGGTCGATCGCGATGATCTGGTGATCGGCGCGAGCCGGGCGGCGCGGTTGCGTCTGGGGTTGAACGACGCGGCGCTGGCCACGCCGCGCGCGCTGGGCCAGCTGCTCGGCGAAGGGGCGGGGCCATCGTTCGAGGACGCCGATCGCGCGGTCCTGCGGCAGGCGCTGGCGCAGGCCGGCGGCAACGCCAGCCAGGCGGCCCGCCTGCTCGGCATCGGCCGGGCCACGCTCTATCGCCGCTTGGCGCGGGCCGGCCTGACCCCGTGA
PROTEIN sequence
Length: 317
VVAARHSDTVLDVVRSPSAAASSAIAASWCRSVLFHGLDPDQHAARERVDGASLSALRAEHEIMLTVAAPVLDQMFRSVGRSGCAVILSDARGVVLERRTNDADADSFTAAGLVQGARWGEAEEGTNGIGTCLYEDQPVIVHRDQHFAGRNVDISCMDAPVHDPHGRLAGALDVSSCRDDHGPAMAEMIAALVRDAARKIERDYFCRHFDGHRIVFLSDDATTGTALLAVDRDDLVIGASRAARLRLGLNDAALATPRALGQLLGEGAGPSFEDADRAVLRQALAQAGGNASQAARLLGIGRATLYRRLARAGLTP*