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2019_SCN_bioreactor_t3_biofilm_scaffold_170411_3

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: 654..1184

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J3A4D8_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 48.6
  • Coverage: 173.0
  • Bit_score: 153
  • Evalue 1.60e-34
Uncharacterized protein {ECO:0000313|EMBL:GAO54143.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 176.0
  • Bit_score: 326
  • Evalue 1.90e-86
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 43.7
  • Coverage: 183.0
  • Bit_score: 131
  • Evalue 2.40e-28

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 531
ATGTCTCTTAGCCCCCGCGACCCCCTGCTGACGGCGGGGCGCCTGATCGTCACCGCCGGCCTCGGCCTCGCCGTCCTGATCGGCGTGACCAGCCTGCTCGGCGCCCCGGCCATCGTCCTGTTCCGGGCCGACGTGCTTGCCGGCATCGCCTCGGAAACCGGCCACGCCGCCAGCACGCAGACCATTCCCGGCCTTGCCGTGATCCTGCTGCTGGTTGCCGCAATGGCCGCCGGGGCCTTCCTGTTCCTGCTCGACCTGCGGCGCATCATCGACAGCGTGGGCGCCGGCGATCCCTTCATCCCCGCCAACGCCCGGCGCCTGACCCGCATGGGCTGGCTGACGCTGGCGGTGGAAGGCCTGTCGTGGCCCGTCGGCGCGATGGGCGTGTGGCTGGCCGGCATGATCGGCAACGCCACGGCGGACTTCGATATCTCGCCGGGATCGTTCCTGCTGGCGATCGTGCTGTTCATTCTCGCCCGCGTCTTTCGCGAAGGGGCGCGGATGCGCGAAGACCTGGAAGGAACCGTGTGA
PROTEIN sequence
Length: 177
MSLSPRDPLLTAGRLIVTAGLGLAVLIGVTSLLGAPAIVLFRADVLAGIASETGHAASTQTIPGLAVILLLVAAMAAGAFLFLLDLRRIIDSVGAGDPFIPANARRLTRMGWLTLAVEGLSWPVGAMGVWLAGMIGNATADFDISPGSFLLAIVLFILARVFREGARMREDLEGTV*