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2019_SCN_bioreactor_t3_biofilm_scaffold_170411_7

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(2935..3876)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B567A5 similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 313.0
  • Bit_score: 502
  • Evalue 1.90e-139
Magnesium and cobalt efflux protein corC {ECO:0000313|EMBL:GAO54148.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 313.0
  • Bit_score: 598
  • Evalue 3.50e-168
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 80.2
  • Coverage: 313.0
  • Bit_score: 494
  • Evalue 1.90e-137

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 942
GCGCTGCGCGCGGCGGAACCGATCGCCATCGTCGCGGCCCGGCCGATGGTGCTGATCGCCCGCATCAACGCGCCGTTCGTGTGGGCGCTGGACCGCTCTTCCGGGCTGCTGCTGCGCTTGCTGCGGCTGAACAAGGGGACGGAGCAGGAGGTCACCGCGGAGGAACTCCAGATGATCTTCGCCGAGGCCACCCGCTCCGGCGTGATCGAGGAGGACGAGCGCGCGCTGATGACCAGCGTGATGCGGCTGGCCGAACGCCCGGTGCGCGAGGTGATGACGCCGCGCACCGAACTGCACTGGATCGAGCGCAAGGCGAGCGAGGCGGAGATCCGCGCCGCGATCGAGGACAGCCCGCATTCGCTGCTGCTGGTGGCGGACGGTTCGGTGGACCGGATCGTGGGCGTGGCCAAGGTGCGCGACGTGCTGTCGGTGCTGTTGCGCGGGCGCAAGGTCATGCTGACGCGGCTGATGAAGAAGCCGGCGATCGTGCCCGATCAGCTCGACACCATGGACGCGCTGCGCGTGATCCAGCAGGCGGAGGTTGCGCTGGCGCTGGTGCACGACGAATACGGCCATCTGGAAGGCATCGTCACCCCGGCGGACCTGCTGGCGGCGATCGCCGGCAATTTCGTGGGCCACGGCGACGAAGGCGATGCGCCGATGATCGTGGAGCGCGAGGACGGCTCGCTGCTGATCGCCGGGGCGCTGCCCGCCGACGCGCTGGGCGACCGGCTGGCGATCGACCTGCCCGAAGACCGCGATTACGCCACCGCCGCCGGTTACGTGCTGTCGGTGCTGAAACACCTGCCGACCGAGGGCGAGCATTTCGCCGAGCAGGGCTGGCGCTTCGAGATTGTCGACATGGACGGCCGCAAGATCGACAAGGTGCTGGTGAGCCGGATCAAGGCCGCGCACCCCGAAAAGGCCGAGCTGGACGGATAG
PROTEIN sequence
Length: 314
ALRAAEPIAIVAARPMVLIARINAPFVWALDRSSGLLLRLLRLNKGTEQEVTAEELQMIFAEATRSGVIEEDERALMTSVMRLAERPVREVMTPRTELHWIERKASEAEIRAAIEDSPHSLLLVADGSVDRIVGVAKVRDVLSVLLRGRKVMLTRLMKKPAIVPDQLDTMDALRVIQQAEVALALVHDEYGHLEGIVTPADLLAAIAGNFVGHGDEGDAPMIVEREDGSLLIAGALPADALGDRLAIDLPEDRDYATAAGYVLSVLKHLPTEGEHFAEQGWRFEIVDMDGRKIDKVLVSRIKAAHPEKAELDG*