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2019_SCN_bioreactor_t3_biofilm_scaffold_299623_20

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(24796..24948)

Top 3 Functional Annotations

Value Algorithm Source
Transposase IS4 n=3 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0IEE8_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 96.0
  • Coverage: 50.0
  • Bit_score: 98
  • Evalue 1.70e-18
Transposase IS4 {ECO:0000313|EMBL:EQB10065.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.0
  • Coverage: 50.0
  • Bit_score: 98
  • Evalue 2.40e-18
transposase, IS4 family protein similarity KEGG
DB: KEGG
  • Identity: 87.2
  • Coverage: 47.0
  • Bit_score: 83
  • Evalue 1.60e-14

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Taxonomy

Novosphingobium lindaniclasticum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 153
AACGATCTCGATCGCCTTCAGGAAGCCACCATCGAAAAGGACGGCAAGGTCATTACCACCCGCACCCACGTTTCGGGCCAGGTTGGGAATGTCTTCAAGGCAACCGGCATCGCGCTGCCGGCCAATATCAGCGAACTGCCGCCGCGAAACTAA
PROTEIN sequence
Length: 51
NDLDRLQEATIEKDGKVITTRTHVSGQVGNVFKATGIALPANISELPPRN*