name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
2019_SCN_bioreactor_t3_biofilm_scaffold_299623_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3..395
|
Na+/proline symporter n=1 Tax=Novosphingobium sp. AP12 RepID=J2Q484_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO53502.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
sodium:solute symporter
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_299623_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
421..1311
|
N-acetylmuramic acid-6-phosphate etherase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0I1L7_9SPHN
N-acetylmuramic acid 6-phosphate etherase {ECO:0000313|EMBL:GAO53501.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
N-acetylmuramic acid-6-phosphate etherase
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_299623_3
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1319..2047
|
GntR family transcriptional regulator n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HS32_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO53500.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
GntR family transcriptional regulator
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_299623_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2258..3436
|
Aspartate aminotransferase {ECO:0000313|EMBL:GAO53499.1}; EC=2.6.1.1 {ECO:0000313|EMBL:GAO53499.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Aromatic-amino-acid transaminase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ76_9SPHN
aromatic-amino-acid transaminase
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_299623_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3433..4410
|
2-dehydropantoate 2-reductase {ECO:0000313|EMBL:GAO53498.1}; EC=1.1.1.169 {ECO:0000313|EMBL:GAO53498.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI0003809815
2-dehydropantoate 2-reductase
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_299623_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4407..5144
|
membrane protein n=1 Tax=Sphingomonas wittichii RepID=UPI0002DF0873
Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases {ECO:0000313|EMBL:GAO53497.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
class II aldolase/adducin family protein
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_299623_7
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5191..6513)
|
Amidohydrolase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V4R4_SPHWW
Xaa-Pro dipeptidase family enzyme {ECO:0000313|EMBL:GAO53476.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
amidohydrolase
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_299623_8
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6582..8870)
|
ligand-gated channel protein n=1 Tax=Sphingomonas wittichii RepID=UPI000306DAA7
Uncharacterized protein {ECO:0000313|EMBL:GAO53475.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
TonB-dependent receptor
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_299623_9
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9450..12209
|
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI000367B915
Secreted protein containing N-terminal Zinc-dependent carboxypeptidase related domain {ECO:0000313|EMBL:GAO53474.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_299623_10
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12214..13356
|
Microsomal dipeptidase {ECO:0000313|EMBL:GAO53473.1}; EC=3.4.13.19 {ECO:0000313|EMBL:GAO53473.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
peptidase M19 n=1 Tax=Sphingomonas wittichii RepID=UPI0002FC39E4
peptidase M19, renal dipeptidase
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_299623_11
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13423..13899
|
Transcriptional regulator, AsnC family n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V9U1_SPHWW
Transcriptional regulator of asnC family {ECO:0000313|EMBL:GAO53472.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
AsnC family transcriptional regulator
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_299623_12
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14223..15521
|
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WI16_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO53471.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_299623_13
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15525..16892)
|
hypothetical protein n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD10A4
Uncharacterized protein {ECO:0000313|EMBL:GAO53470.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_299623_14
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16968..18542)
|
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:GAO53469.1}; EC=6.2.1.3 {ECO:0000313|EMBL:GAO53469.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
PREDICTED: 4-coumarate--CoA ligase-like 2-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C198BB
acyl-CoA synthetase
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_299623_15
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18539..19366)
|
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI0003724558
Uncharacterized protein {ECO:0000313|EMBL:GAO53468.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_299623_16
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19363..21324)
|
Glucose dehydrogenase, PQQ-dependent {ECO:0000313|EMBL:GAO53467.1}; EC=1.1.5.2 {ECO:0000313|EMBL:GAO53467.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
quinoprotein glucose dehydrogenase (EC:1.1.5.2)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00036EFD52
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_299623_17
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21333..23510)
|
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI000367AB9E
Uncharacterized protein {ECO:0000313|EMBL:GAO53466.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
putative TonB dependent receptor
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_299623_18
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23690..24292
|
Uncharacterized protein n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z6G4_9ACTN
Transcriptional regulator of tetR family {ECO:0000313|EMBL:GAO53465.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
transcriptional regulator, TetR family
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_299623_19
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24382..24783
|
Uncharacterized protein n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4PEK4_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:GAO53464.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
|
|
2019_SCN_bioreactor_t3_biofilm_scaffold_299623_20
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24796..24948)
|
Transposase IS4 n=3 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0IEE8_9SPHN
Transposase IS4 {ECO:0000313|EMBL:EQB10065.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
transposase, IS4 family protein
|