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2019_SCN_bioreactor_t3_biofilm_scaffold_308253_8

Organism: 2019_SCN_bioreactor_t3_biofilm_Novosphingobium_sp_MD-1_67_8

near complete RP 43 / 55 MC: 1 BSCG 42 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(4717..4890)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter ATP-binding protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B45BEF similarity UNIREF
DB: UNIREF100
  • Identity: 87.0
  • Coverage: 54.0
  • Bit_score: 96
  • Evalue 7.40e-18
ABC-type multidrug transport system ATPase component {ECO:0000313|EMBL:GAO54854.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.2
  • Coverage: 57.0
  • Bit_score: 110
  • Evalue 7.00e-22
ABC transporter ATP-binding/permease similarity KEGG
DB: KEGG
  • Identity: 84.2
  • Coverage: 57.0
  • Bit_score: 95
  • Evalue 2.70e-18

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Taxonomy

Novosphingobium sp. MD-1 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 174
GACCGCACCACGCTGGTCATCGCGCACCGGCTGGCCACGATCCGCGCGGCCGACCGGATCATCGTGATGGATGGCGGGCGGATCGTCGAACAGGGCAACCACGCCAGCCTGACCGCCGCCAACGGGCTCTACGCCCGGCTTGCGCGGTTGCAGTTCCAGGACGCCGCCGCCTGA
PROTEIN sequence
Length: 58
DRTTLVIAHRLATIRAADRIIVMDGGRIVEQGNHASLTAANGLYARLARLQFQDAAA*