ggKbase | organisms

Consensus taxonomy: Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Metagenomic Context

Parent: 2019_SCN_bioreactor_t3_planktonic_UNK

Properties

Avg. coverage: 6.13 Longest contig: 30.70 Kbp Bin length: 5.23 Mbp GC content: 54.48 %

Contigs count: 1189 Features count: 4827 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3

Displaying items 651-700 of 1189 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
2019_SCN_bioreactor_t3_planktonic_scaffold_48415 Species: Planctopirus limnophila (50%)	2	1319 bp	54.66	6.03	103.72
2019_SCN_bioreactor_t3_planktonic_scaffold_1861 Species: Singulisphaera acidiphila (50%)	2	1753 bp	52.25	7.02	69.14
2019_SCN_bioreactor_t3_planktonic_scaffold_38171 Species: Pirellula staleyi (100%)	2	1553 bp	52.93	5.31	100.26
2019_SCN_bioreactor_t3_planktonic_scaffold_130367 Species: Gimesia maris (50%)	2	1988 bp	57.39	5.81	99.45
2019_SCN_bioreactor_t3_planktonic_scaffold_96307 Species: Gimesia maris (50%)	2	2617 bp	54.68	5.22	58.01
2019_SCN_bioreactor_t3_planktonic_scaffold_52164 Species: RBG_16_Planctomycetes_64_12_curated (100%)	2	1239 bp	55.04	5.57	93.95
2019_SCN_bioreactor_t3_planktonic_scaffold_5277 Species: Gimesia maris (50%)	2	1370 bp	53.72	6.90	63.94
2019_SCN_bioreactor_t3_planktonic_scaffold_117408 Species: Blastopirellula marina (50%)	2	1226 bp	52.69	4.65	67.29
2019_SCN_bioreactor_t3_planktonic_scaffold_110555 Species: Blastopirellula marina (50%)	2	1022 bp	55.58	6.60	79.55
2019_SCN_bioreactor_t3_planktonic_scaffold_7615 Species: Rhodopirellula europaea (50%)	2	1046 bp	54.59	6.45	78.59
2019_SCN_bioreactor_t3_planktonic_scaffold_50926 Species: Planctopirus limnophila (50%)	2	1427 bp	51.51	5.05	96.50
2019_SCN_bioreactor_t3_planktonic_scaffold_122459 Species: Rubinisphaera brasiliensis (50%)	2	1427 bp	56.83	6.73	95.87
2019_SCN_bioreactor_t3_planktonic_scaffold_28561 Species: Gimesia maris (50%)	2	1429 bp	54.44	6.51	99.09
2019_SCN_bioreactor_t3_planktonic_scaffold_57067 Species: Gimesia maris (50%)	2	1418 bp	55.01	6.56	86.74
2019_SCN_bioreactor_t3_planktonic_scaffold_62263 Species: Rhodopirellula maiorica (50%)	2	4482 bp	57.05	5.15	93.44
2019_SCN_bioreactor_t3_planktonic_scaffold_52202 Species: Gimesia maris (50%)	2	3864 bp	56.26	4.89	92.00
2019_SCN_bioreactor_t3_planktonic_scaffold_86686 Species: Planctopirus limnophila (100%)	2	1111 bp	52.93	3.51	96.13
2019_SCN_bioreactor_t3_planktonic_scaffold_132963 Species: Planctopirus limnophila (50%)	2	1598 bp	56.82	7.32	80.73
2019_SCN_bioreactor_t3_planktonic_scaffold_86690 Species: Singulisphaera acidiphila (50%)	2	1694 bp	50.83	5.67	86.25
2019_SCN_bioreactor_t3_planktonic_scaffold_5320 Species: RBG_16_Planctomycetes_64_10_curated (50%)	2	1475 bp	54.10	7.63	81.97
2019_SCN_bioreactor_t3_planktonic_scaffold_42199 Species: Gimesia maris (50%)	2	1054 bp	52.94	3.70	88.52
2019_SCN_bioreactor_t3_planktonic_scaffold_122488 Species: Planctopirus limnophila (50%)	2	1009 bp	51.14	4.31	61.55
2019_SCN_bioreactor_t3_planktonic_scaffold_99512 Species: Planctopirus limnophila (50%)	2	1106 bp	51.54	5.56	67.00
2019_SCN_bioreactor_t3_planktonic_scaffold_110615 Species: Planctopirus limnophila (100%)	2	1268 bp	54.89	6.03	91.32
2019_SCN_bioreactor_t3_planktonic_scaffold_106522 Species: Planctopirus limnophila (50%)	2	2256 bp	55.59	5.72	96.28
2019_SCN_bioreactor_t3_planktonic_scaffold_113385 Species: Rubinisphaera brasiliensis (50%)	2	1592 bp	52.01	6.12	90.64
2019_SCN_bioreactor_t3_planktonic_scaffold_71706 Species: Planctopirus limnophila (50%)	2	1341 bp	53.09	5.15	78.30
2019_SCN_bioreactor_t3_planktonic_scaffold_119796 Species: Rubinisphaera brasiliensis (50%)	2	1712 bp	53.50	6.31	89.89
2019_SCN_bioreactor_t3_planktonic_scaffold_73870 Species: Gimesia maris (50%)	2	3215 bp	55.02	6.44	96.58
2019_SCN_bioreactor_t3_planktonic_scaffold_5341 Species: Gimesia maris (50%)	2	2882 bp	55.69	5.46	89.42
2019_SCN_bioreactor_t3_planktonic_scaffold_7701 Species: Gimesia maris (50%)	2	1059 bp	54.96	5.38	100.28
2019_SCN_bioreactor_t3_planktonic_scaffold_33183 Species: Gimesia maris (50%)	2	1677 bp	54.62	5.64	90.16
2019_SCN_bioreactor_t3_planktonic_scaffold_45089 Species: Planctopirus limnophila (50%)	2	1348 bp	52.67	4.23	73.89
2019_SCN_bioreactor_t3_planktonic_scaffold_6471 Species: Planctopirus limnophila (100%)	2	1861 bp	54.59	4.76	33.21
2019_SCN_bioreactor_t3_planktonic_scaffold_34355 Species: Planctopirus limnophila (50%)	2	2141 bp	55.02	6.03	97.66
2019_SCN_bioreactor_t3_planktonic_scaffold_130486 Species: Gimesia maris (50%)	2	1001 bp	55.04	5.09	93.81
2019_SCN_bioreactor_t3_planktonic_scaffold_29986 Species: Gimesia maris (50%)	2	1259 bp	52.58	3.57	83.88
2019_SCN_bioreactor_t3_planktonic_scaffold_70504 Species: Planctopirus limnophila (50%)	2	1024 bp	55.37	6.15	100.20
2019_SCN_bioreactor_t3_planktonic_scaffold_100800 Species: Gimesia maris (50%)	2	2728 bp	52.64	6.16	61.80
2019_SCN_bioreactor_t3_planktonic_scaffold_81719 Species: Pirellula staleyi (50%)	2	1600 bp	55.19	6.94	84.56
2019_SCN_bioreactor_t3_planktonic_scaffold_3191 Species: Blastopirellula marina (50%)	2	4322 bp	55.32	5.93	98.57
2019_SCN_bioreactor_t3_planktonic_scaffold_127620 Species: Planctopirus limnophila (50%)	2	1539 bp	52.44	6.63	64.72
2019_SCN_bioreactor_t3_planktonic_scaffold_26180 Species: Gimesia maris (50%)	2	2088 bp	53.64	5.89	92.39
2019_SCN_bioreactor_t3_planktonic_scaffold_98117 Species: Singulisphaera acidiphila (50%)	2	2425 bp	51.26	5.75	67.79
2019_SCN_bioreactor_t3_planktonic_scaffold_91258 Species: Planctopirus limnophila (100%)	2	1519 bp	54.05	6.71	87.69
2019_SCN_bioreactor_t3_planktonic_scaffold_91260 Species: Gimesia maris (50%)	2	2831 bp	55.03	6.89	92.30
2019_SCN_bioreactor_t3_planktonic_scaffold_139327 Species: Rhodopirellula maiorica (50%)	2	3340 bp	54.64	5.70	87.66
2019_SCN_bioreactor_t3_planktonic_scaffold_30021 Species: Planctopirus limnophila (50%)	2	2816 bp	53.55	4.79	82.35
2019_SCN_bioreactor_t3_planktonic_scaffold_67980 Species: Planctopirus limnophila (50%)	2	1646 bp	53.40	5.29	72.72
2019_SCN_bioreactor_t3_planktonic_scaffold_7767 Species: Pirellula staleyi (50%)	2	1129 bp	57.75	6.11	98.85

Displaying items 651-700 of 1189 in total

2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

2019_SCN_bioreactor_t3_planktonic_Planctomycetales_54_6

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

2019_SCN_bioreactor_t3_planktonic_Planctomycetales_54_6

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

Merge with other organism

Processing

Terms of Service

Search Help