ggKbase | organisms

Consensus taxonomy: Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Metagenomic Context

Parent: 2019_SCN_bioreactor_t3_planktonic_UNK

Properties

Avg. coverage: 6.13 Longest contig: 30.70 Kbp Bin length: 5.23 Mbp GC content: 54.48 %

Contigs count: 1189 Features count: 4827 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3

Displaying items 701-750 of 1189 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
2019_SCN_bioreactor_t3_planktonic_scaffold_14698 Species: RBG_16_Planctomycetes_64_12_curated (50%)	2	1367 bp	54.21	6.47	90.42
2019_SCN_bioreactor_t3_planktonic_scaffold_122608 Species: Planctopirus limnophila (50%)	2	1695 bp	52.33	4.42	66.19
2019_SCN_bioreactor_t3_planktonic_scaffold_75253 Species: Singulisphaera acidiphila (50%)	2	1283 bp	55.81	5.03	94.47
2019_SCN_bioreactor_t3_planktonic_scaffold_49866 Species: Planctopirus limnophila (50%)	2	2244 bp	54.06	6.62	85.03
2019_SCN_bioreactor_t3_planktonic_scaffold_58371 Species: RBG_13_Planctomycetes_63_9_curated (50%)	2	1744 bp	55.39	8.34	80.50
2019_SCN_bioreactor_t3_planktonic_scaffold_126354 Species: Gimesia maris (50%)	2	1588 bp	54.97	5.67	99.18
2019_SCN_bioreactor_t3_planktonic_scaffold_32510 Species: Planctopirus limnophila (50%)	2	1157 bp	54.36	6.22	65.86
2019_SCN_bioreactor_t3_planktonic_scaffold_66370 Species: Gimesia maris (100%)	2	3192 bp	55.70	5.45	88.16
2019_SCN_bioreactor_t3_planktonic_scaffold_3247 Species: Rhodopirellula baltica (50%)	2	1133 bp	54.19	5.69	97.44
2019_SCN_bioreactor_t3_planktonic_scaffold_99639 Species: Gimesia maris (100%)	2	1648 bp	52.06	5.37	66.63
2019_SCN_bioreactor_t3_planktonic_scaffold_71833 Species: RBG_13_Planctomycetes_50_24_curated (50%)	2	1050 bp	53.43	4.71	92.29
2019_SCN_bioreactor_t3_planktonic_scaffold_116180 Species: Planctopirus limnophila (100%)	2	1743 bp	53.24	6.20	81.58
2019_SCN_bioreactor_t3_planktonic_scaffold_18274 Species: Rubinisphaera brasiliensis (50%)	2	1456 bp	52.54	5.46	90.45
2019_SCN_bioreactor_t3_planktonic_scaffold_79305 Species: Rubinisphaera brasiliensis (50%)	2	1807 bp	56.61	6.47	98.62
2019_SCN_bioreactor_t3_planktonic_scaffold_125136 Species: Planctopirus limnophila (50%)	2	1102 bp	56.17	4.90	98.55
2019_SCN_bioreactor_t3_planktonic_scaffold_135282 Species: Planctopirus limnophila (100%)	2	1141 bp	53.02	5.92	58.63
2019_SCN_bioreactor_t3_planktonic_scaffold_42754 Species: Planctopirus limnophila (50%)	2	1044 bp	55.65	7.18	67.82
2019_SCN_bioreactor_t3_planktonic_scaffold_139555 Species: RBG_16_Planctomycetes_64_12_curated (50%)	2	1191 bp	51.13	4.03	82.87
2019_SCN_bioreactor_t3_planktonic_scaffold_63764 Species: Singulisphaera acidiphila (50%)	2	2450 bp	52.65	5.14	61.84
2019_SCN_bioreactor_t3_planktonic_scaffold_15897 Species: Planctopirus limnophila (50%)	2	3271 bp	53.47	6.33	88.69
2019_SCN_bioreactor_t3_planktonic_scaffold_18293 Species: Gimesia maris (50%)	2	3891 bp	52.69	6.44	100.08
2019_SCN_bioreactor_t3_planktonic_scaffold_116235 Species: Gimesia maris (50%)	2	1177 bp	52.93	6.12	32.63
2019_SCN_bioreactor_t3_planktonic_scaffold_112182 Species: Singulisphaera acidiphila (50%)	2	2613 bp	54.00	6.49	89.67
2019_SCN_bioreactor_t3_planktonic_scaffold_62509 Species: Gimesia maris (50%)	2	2705 bp	54.27	5.71	91.16
2019_SCN_bioreactor_t3_planktonic_scaffold_137898 Species: Rubinisphaera brasiliensis (50%)	2	1364 bp	53.67	5.28	82.48
2019_SCN_bioreactor_t3_planktonic_scaffold_84222 Species: Planctopirus limnophila (50%)	2	1786 bp	55.82	5.21	91.21
2019_SCN_bioreactor_t3_planktonic_scaffold_90094 Species: Planctopirus limnophila (50%)	2	1267 bp	54.38	6.87	74.59
2019_SCN_bioreactor_t3_planktonic_scaffold_114858 Species: Isosphaera pallida (50%)	2	3064 bp	54.37	7.44	97.62
2019_SCN_bioreactor_t3_planktonic_scaffold_38430 Species: Gimesia maris (50%)	2	1476 bp	55.49	6.30	79.88
2019_SCN_bioreactor_t3_planktonic_scaffold_108094 Species: Planctopirus limnophila (50%)	2	2959 bp	54.51	5.02	100.07
2019_SCN_bioreactor_t3_planktonic_scaffold_5481 Species: Singulisphaera acidiphila (50%)	2	4063 bp	56.51	5.65	93.55
2019_SCN_bioreactor_t3_planktonic_scaffold_133203 Species: Rhodopirellula maiorica (50%)	2	1859 bp	53.47	4.92	97.96
2019_SCN_bioreactor_t3_planktonic_scaffold_44013 Species: RBG_16_Planctomycetes_64_10_curated (50%)	2	5868 bp	55.16	7.03	91.51
2019_SCN_bioreactor_t3_planktonic_scaffold_62549 Species: Planctopirus limnophila (50%)	2	1655 bp	52.99	4.89	72.51
2019_SCN_bioreactor_t3_planktonic_scaffold_99714 Species: Planctopirus limnophila (50%)	2	1972 bp	55.22	5.40	99.80
2019_SCN_bioreactor_t3_planktonic_scaffold_59699 Species: Pirellula staleyi (50%)	2	1112 bp	55.58	3.78	84.98
2019_SCN_bioreactor_t3_planktonic_scaffold_72773 Species: Rubinisphaera brasiliensis (50%)	2	1528 bp	54.78	6.38	99.35
2019_SCN_bioreactor_t3_planktonic_scaffold_42852 Species: Rhodopirellula baltica (50%)	2	2105 bp	53.63	5.99	46.03
2019_SCN_bioreactor_t3_planktonic_scaffold_12753 Species: Gimesia maris (50%)	2	3364 bp	53.39	5.35	93.10
2019_SCN_bioreactor_t3_planktonic_scaffold_130657 Species: Planctopirus limnophila (50%)	2	1233 bp	54.83	4.62	71.53
2019_SCN_bioreactor_t3_planktonic_scaffold_81909 Species: Singulisphaera acidiphila (50%)	2	1027 bp	53.94	5.84	93.18
2019_SCN_bioreactor_t3_planktonic_scaffold_114918 Species: Gimesia maris (50%)	2	1095 bp	55.25	7.40	65.48
2019_SCN_bioreactor_t3_planktonic_scaffold_86979 Species: Candidatus Brocadia sinica (50%)	2	1567 bp	52.27	5.74	70.64
2019_SCN_bioreactor_t3_planktonic_scaffold_14860 Species: Blastopirellula marina (50%)	2	1728 bp	55.32	5.30	90.63
2019_SCN_bioreactor_t3_planktonic_scaffold_37278 Species: Rhodopirellula baltica (50%)	2	2389 bp	52.62	5.65	87.53
2019_SCN_bioreactor_t3_planktonic_scaffold_120068 Species: Gimesia maris (50%)	2	1600 bp	51.44	5.63	77.81
2019_SCN_bioreactor_t3_planktonic_scaffold_85661 Species: Planctopirus limnophila (50%)	2	1288 bp	57.38	5.12	95.73
2019_SCN_bioreactor_t3_planktonic_scaffold_57346 Species: Gimesia maris (100%)	2	1273 bp	52.87	7.07	64.10
2019_SCN_bioreactor_t3_planktonic_scaffold_130675 Species: RBG_16_Planctomycetes_64_12_curated (50%)	2	2790 bp	54.12	4.46	74.73
2019_SCN_bioreactor_t3_planktonic_scaffold_68126 Species: Pirellula staleyi (50%)	2	1548 bp	52.65	5.91	93.22

Displaying items 701-750 of 1189 in total

2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

2019_SCN_bioreactor_t3_planktonic_Planctomycetales_54_6

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

2019_SCN_bioreactor_t3_planktonic_Planctomycetales_54_6

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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