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2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

2019_SCN_bioreactor_t3_planktonic_Planctomycetales_54_6
In projects: 2019_SCN_bioreactor_t3_planktonic  |  SCN_ET-SeqDB_Dereplicated  |  SCN_92

Consensus taxonomy: Planctomycetales  →  Planctomycetia  →  Planctomycetes  →  Bacteria

Metagenomic Context

Parent: 2019_SCN_bioreactor_t3_planktonic_UNK

Properties

Avg. coverage: 6.13 Longest contig: 30.70 Kbp Bin length: 5.23 Mbp GC content: 54.48 %
Contigs count: 1189 Features count: 4827 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Displaying items 951-1000 of 1189 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
2019_SCN_bioreactor_t3_planktonic_scaffold_60385
Species: Blastopirellula marina (50%)
2 2764 bp 52.79 5.86 80.32
2019_SCN_bioreactor_t3_planktonic_scaffold_35164
Species: Rhodopirellula maiorica (50%)
2 1304 bp 52.68 4.83 98.70
2019_SCN_bioreactor_t3_planktonic_scaffold_131324
Species: Gimesia maris (100%)
2 1740 bp 55.40 6.81 89.83
2019_SCN_bioreactor_t3_planktonic_scaffold_79930
Species: Planctopirus limnophila (50%)
2 1069 bp 55.57 4.91 92.89
2019_SCN_bioreactor_t3_planktonic_scaffold_28228
Species: RBG_13_Planctomycetes_63_9_curated (50%)
2 1238 bp 53.88 6.66 114.62
2019_SCN_bioreactor_t3_planktonic_scaffold_123385
Species: RBG_16_Planctomycetes_64_10_curated (50%)
2 1586 bp 54.41 5.58 98.55
2019_SCN_bioreactor_t3_planktonic_scaffold_130016
Species: Planctopirus limnophila (50%)
2 1647 bp 55.43 6.28 73.04
2019_SCN_bioreactor_t3_planktonic_scaffold_118530
Species: Rhodopirellula baltica (50%)
2 1783 bp 55.47 7.66 75.55
2019_SCN_bioreactor_t3_planktonic_scaffold_135953
Species: Rhodopirellula sp. SWK7 (50%)
2 1062 bp 53.77 4.80 83.33
2019_SCN_bioreactor_t3_planktonic_scaffold_110233
Species: Gimesia maris (50%)
2 1892 bp 57.40 5.71 95.93
2019_SCN_bioreactor_t3_planktonic_scaffold_85054
Species: Planctopirus limnophila (100%)
2 2736 bp 50.33 7.18 67.11
2019_SCN_bioreactor_t3_planktonic_scaffold_106137
Species: RBG_16_Planctomycetes_64_12_curated (50%)
2 1505 bp 57.01 5.38 98.27
2019_SCN_bioreactor_t3_planktonic_scaffold_93490
Species: Pirellula staleyi (50%)
2 1197 bp 53.88 5.39 60.90
2019_SCN_bioreactor_t3_planktonic_scaffold_32869
Species: RBG_13_Planctomycetes_63_9_curated (50%)
2 1105 bp 52.49 4.07 57.83
2019_SCN_bioreactor_t3_planktonic_scaffold_103392
Species: Gimesia maris (50%)
2 1443 bp 52.95 4.68 100.21
2019_SCN_bioreactor_t3_planktonic_scaffold_44791
Species: Singulisphaera acidiphila (50%)
2 2245 bp 53.67 5.28 100.09
2019_SCN_bioreactor_t3_planktonic_scaffold_32121
Species: Blastopirellula marina (50%)
2 2000 bp 52.50 4.80 66.15
2019_SCN_bioreactor_t3_planktonic_scaffold_23581
Species: Singulisphaera acidiphila (100%)
2 1114 bp 56.91 4.71 74.60
2019_SCN_bioreactor_t3_planktonic_scaffold_6184
Species: Pirellula staleyi (50%)
2 1861 bp 51.85 6.13 95.92
2019_SCN_bioreactor_t3_planktonic_scaffold_36517
Species: Singulisphaera acidiphila (50%)
2 1515 bp 55.64 5.35 83.96
2019_SCN_bioreactor_t3_planktonic_scaffold_131366
Species: Planctopirus limnophila (50%)
2 1183 bp 54.61 5.96 83.94
2019_SCN_bioreactor_t3_planktonic_scaffold_27026
Species: Pirellula staleyi (50%)
2 1633 bp 54.26 6.15 96.82
2019_SCN_bioreactor_t3_planktonic_scaffold_51920
Species: Rhodopirellula sp. SWK7 (50%)
2 2184 bp 52.47 5.56 92.72
2019_SCN_bioreactor_t3_planktonic_scaffold_122217
Species: Planctopirus limnophila (50%)
2 1293 bp 54.37 5.57 99.07
2019_SCN_bioreactor_t3_planktonic_scaffold_126001
Species: Gimesia maris (50%)
2 1532 bp 57.25 5.87 74.22
2019_SCN_bioreactor_t3_planktonic_scaffold_111775
Species: Planctopirus limnophila (50%)
2 1069 bp 52.20 4.91 94.86
2019_SCN_bioreactor_t3_planktonic_scaffold_82459
Species: Singulisphaera acidiphila (50%)
2 1241 bp 53.10 4.59 72.04
2019_SCN_bioreactor_t3_planktonic_scaffold_9983
Species: Singulisphaera acidiphila (50%)
2 1553 bp 56.28 6.76 86.74
2019_SCN_bioreactor_t3_planktonic_scaffold_44870
Species: Planctopirus limnophila (50%)
2 1448 bp 52.97 7.46 66.92
2019_SCN_bioreactor_t3_planktonic_scaffold_99264
Species: Singulisphaera acidiphila (100%)
2 2807 bp 57.00 5.77 97.04
2019_SCN_bioreactor_t3_planktonic_scaffold_78835
Species: Planctopirus limnophila (50%)
2 1905 bp 53.75 5.43 71.50
2019_SCN_bioreactor_t3_planktonic_scaffold_27088
Species: Gimesia maris (50%)
2 2446 bp 55.07 5.34 76.90
2019_SCN_bioreactor_t3_planktonic_scaffold_128771
Species: Planctopirus limnophila (100%)
2 1829 bp 52.32 5.82 96.61
2019_SCN_bioreactor_t3_planktonic_scaffold_137465
Species: Gimesia maris (50%)
2 1729 bp 52.86 6.33 98.38
2019_SCN_bioreactor_t3_planktonic_scaffold_22471
Species: Gimesia maris (50%)
2 1472 bp 55.30 4.28 85.80
2019_SCN_bioreactor_t3_planktonic_scaffold_124734
Species: Singulisphaera acidiphila (50%)
2 1672 bp 55.56 7.81 58.13
2019_SCN_bioreactor_t3_planktonic_scaffold_134936
Species: Rubinisphaera brasiliensis (100%)
2 2024 bp 56.03 5.48 72.04
2019_SCN_bioreactor_t3_planktonic_scaffold_64718
Species: Singulisphaera acidiphila (100%)
2 2595 bp 54.10 4.91 97.57
2019_SCN_bioreactor_t3_planktonic_scaffold_100570
Species: Planctopirus limnophila (50%)
2 1110 bp 55.14 4.73 65.95
2019_SCN_bioreactor_t3_planktonic_scaffold_60548
Species: Gimesia maris (100%)
2 2004 bp 54.39 5.54 89.37
2019_SCN_bioreactor_t3_planktonic_scaffold_7474
Species: GWF2_Planctomycetes_50_10_curated (50%)
2 2061 bp 54.92 4.66 91.27
2019_SCN_bioreactor_t3_planktonic_scaffold_6276
Species: Planctopirus limnophila (100%)
2 2883 bp 55.01 5.98 85.54
2019_SCN_bioreactor_t3_planktonic_scaffold_3004
Species: Planctopirus limnophila (50%)
2 2102 bp 55.28 6.99 85.92
2019_SCN_bioreactor_t3_planktonic_scaffold_622
Species: Blastopirellula marina (50%)
2 1403 bp 57.23 5.45 80.19
2019_SCN_bioreactor_t3_planktonic_scaffold_62145
Species: Gimesia maris (50%)
2 3446 bp 55.31 6.79 94.20
2019_SCN_bioreactor_t3_planktonic_scaffold_72379
Species: Gimesia maris (50%)
2 1914 bp 53.19 5.49 88.09
2019_SCN_bioreactor_t3_planktonic_scaffold_70260
Species: Blastopirellula marina (50%)
2 1177 bp 56.16 4.08 100.43
2019_SCN_bioreactor_t3_planktonic_scaffold_123550
Species: RBG_16_Planctomycetes_64_12_curated (50%)
2 1252 bp 54.55 5.75 100.16
2019_SCN_bioreactor_t3_planktonic_scaffold_130255
Species: RBG_16_Planctomycetes_64_12_curated (50%)
2 1286 bp 57.00 7.35 96.11
2019_SCN_bioreactor_t3_planktonic_scaffold_29768
Species: Planctopirus limnophila (100%)
2 1251 bp 50.84 5.28 60.67
Displaying items 951-1000 of 1189 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.