ggKbase | organisms

Consensus taxonomy: Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Metagenomic Context

Parent: 2019_SCN_bioreactor_t3_planktonic_UNK

Properties

Avg. coverage: 6.13 Longest contig: 30.70 Kbp Bin length: 5.23 Mbp GC content: 54.48 %

Contigs count: 1189 Features count: 4827 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3

Displaying items 901-950 of 1189 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
2019_SCN_bioreactor_t3_planktonic_scaffold_115438 Species: Blastopirellula marina (50%)	2	1694 bp	55.14	4.69	95.10
2019_SCN_bioreactor_t3_planktonic_scaffold_101543 Species: Gimesia maris (50%)	2	1977 bp	53.41	5.39	91.96
2019_SCN_bioreactor_t3_planktonic_scaffold_128450 Species: Gimesia maris (50%)	2	1388 bp	54.61	6.38	98.34
2019_SCN_bioreactor_t3_planktonic_scaffold_13244 Species: Gimesia maris (100%)	2	2024 bp	55.98	5.63	93.38
2019_SCN_bioreactor_t3_planktonic_scaffold_49304 Species: Planctopirus limnophila (100%)	2	3365 bp	55.69	6.11	84.07
2019_SCN_bioreactor_t3_planktonic_scaffold_134646 Species: Planctopirus limnophila (50%)	2	1423 bp	54.74	4.53	64.93
2019_SCN_bioreactor_t3_planktonic_scaffold_35013 Species: Singulisphaera acidiphila (50%)	2	1868 bp	56.53	5.54	72.75
2019_SCN_bioreactor_t3_planktonic_scaffold_67332 Species: Planctopirus limnophila (100%)	2	1855 bp	54.72	4.37	80.05
2019_SCN_bioreactor_t3_planktonic_scaffold_90719 Species: Planctopirus limnophila (100%)	2	1251 bp	56.04	4.68	86.81
2019_SCN_bioreactor_t3_planktonic_scaffold_91976 Species: Gimesia maris (50%)	2	1607 bp	52.83	6.25	40.14
2019_SCN_bioreactor_t3_planktonic_scaffold_30695 Species: Rubinisphaera brasiliensis (50%)	2	1499 bp	54.10	3.70	64.44
2019_SCN_bioreactor_t3_planktonic_scaffold_112796 Species: Gimesia maris (50%)	2	1256 bp	54.94	5.97	70.70
2019_SCN_bioreactor_t3_planktonic_scaffold_31955 Species: Planctopirus limnophila (50%)	2	1570 bp	51.91	4.68	74.90
2019_SCN_bioreactor_t3_planktonic_scaffold_44596 Species: RBG_16_Planctomycetes_64_12_curated (50%)	2	1384 bp	55.35	7.15	99.71
2019_SCN_bioreactor_t3_planktonic_scaffold_37763 Species: Rhodopirellula baltica (50%)	2	1306 bp	53.06	5.17	102.91
2019_SCN_bioreactor_t3_planktonic_scaffold_69932 Species: RBG_16_Planctomycetes_64_10_curated (50%)	2	3429 bp	53.86	6.21	93.44
2019_SCN_bioreactor_t3_planktonic_scaffold_112823 Species: Gimesia maris (50%)	2	1804 bp	53.88	6.49	88.64
2019_SCN_bioreactor_t3_planktonic_scaffold_128518 Species: Blastopirellula marina (50%)	2	2430 bp	55.76	4.81	95.56
2019_SCN_bioreactor_t3_planktonic_scaffold_108663 Species: Rubinisphaera brasiliensis (50%)	2	1238 bp	52.99	6.42	62.52
2019_SCN_bioreactor_t3_planktonic_scaffold_99010 Species: Singulisphaera acidiphila (50%)	2	1110 bp	56.85	6.49	84.05
2019_SCN_bioreactor_t3_planktonic_scaffold_121984 Species: Planctopirus limnophila (50%)	2	1553 bp	54.02	5.99	62.20
2019_SCN_bioreactor_t3_planktonic_scaffold_132570 Species: Singulisphaera acidiphila (50%)	2	2312 bp	54.89	6.23	93.69
2019_SCN_bioreactor_t3_planktonic_scaffold_59033 Species: RBG_13_Planctomycetes_63_9_curated (50%)	2	2084 bp	55.04	6.26	92.27
2019_SCN_bioreactor_t3_planktonic_scaffold_134706 Species: Planctopirus limnophila (50%)	2	1793 bp	54.10	4.94	57.39
2019_SCN_bioreactor_t3_planktonic_scaffold_78588 Species: Rubinisphaera brasiliensis (50%)	2	1413 bp	53.79	5.31	57.54
2019_SCN_bioreactor_t3_planktonic_scaffold_110116 Species: Rhodopirellula maiorica (50%)	2	1151 bp	56.65	7.30	99.57
2019_SCN_bioreactor_t3_planktonic_scaffold_15336 Species: Planctopirus limnophila (100%)	2	2286 bp	55.64	6.63	90.68
2019_SCN_bioreactor_t3_planktonic_scaffold_79871 Species: Planctopirus limnophila (50%)	2	1760 bp	52.56	5.37	76.19
2019_SCN_bioreactor_t3_planktonic_scaffold_94684 Species: Gimesia maris (50%)	2	1090 bp	48.99	6.06	51.47
2019_SCN_bioreactor_t3_planktonic_scaffold_74707 Species: Rhodopirellula sp. SWK7 (50%)	2	1110 bp	52.07	4.59	70.81
2019_SCN_bioreactor_t3_planktonic_scaffold_40403 Species: Planctopirus limnophila (50%)	2	3944 bp	53.96	6.58	93.48
2019_SCN_bioreactor_t3_planktonic_scaffold_123340 Species: Planctopirus limnophila (50%)	2	2201 bp	54.43	7.43	92.55
2019_SCN_bioreactor_t3_planktonic_scaffold_7253 Species: Planctopirus limnophila (50%)	2	1423 bp	54.74	4.85	92.55
2019_SCN_bioreactor_t3_planktonic_scaffold_12178 Species: Gimesia maris (50%)	2	1852 bp	54.00	6.48	85.37
2019_SCN_bioreactor_t3_planktonic_scaffold_54271 Species: Gimesia maris (50%)	2	1375 bp	52.58	4.15	96.44
2019_SCN_bioreactor_t3_planktonic_scaffold_44673 Species: Gimesia maris (50%)	2	2739 bp	52.72	5.97	75.58
2019_SCN_bioreactor_t3_planktonic_scaffold_76054 Species: Planctopirus limnophila (50%)	2	1309 bp	54.62	5.96	82.96
2019_SCN_bioreactor_t3_planktonic_scaffold_107326 Species: Singulisphaera acidiphila (100%)	2	2773 bp	56.22	6.44	99.86
2019_SCN_bioreactor_t3_planktonic_scaffold_114270 Species: Gimesia maris (100%)	2	2215 bp	51.78	6.23	78.56
2019_SCN_bioreactor_t3_planktonic_scaffold_13352 Species: Gimesia maris (50%)	2	1575 bp	56.00	5.90	89.33
2019_SCN_bioreactor_t3_planktonic_scaffold_56900 Species: Gimesia maris (50%)	2	1954 bp	52.46	4.99	81.83
2019_SCN_bioreactor_t3_planktonic_scaffold_17816 Species: Gimesia maris (50%)	2	1742 bp	54.13	6.63	78.01
2019_SCN_bioreactor_t3_planktonic_scaffold_70016 Species: Rubinisphaera brasiliensis (50%)	2	3223 bp	54.02	6.14	52.40
2019_SCN_bioreactor_t3_planktonic_scaffold_56907 Species: Planctopirus limnophila (100%)	2	2410 bp	54.61	6.16	90.12
2019_SCN_bioreactor_t3_planktonic_scaffold_40470 Species: Planctopirus limnophila (100%)	2	1754 bp	52.79	5.05	68.59
2019_SCN_bioreactor_t3_planktonic_scaffold_90852 Species: RBG_16_Planctomycetes_64_12_curated (50%)	2	1162 bp	53.18	5.94	81.58
2019_SCN_bioreactor_t3_planktonic_scaffold_112949 Species: Blastopirellula marina (50%)	2	1292 bp	56.19	5.22	88.93
2019_SCN_bioreactor_t3_planktonic_scaffold_122109 Species: Rubinisphaera brasiliensis (50%)	2	1306 bp	51.38	5.28	84.99
2019_SCN_bioreactor_t3_planktonic_scaffold_26978 Species: Gimesia maris (50%)	2	2967 bp	54.80	6.07	98.69
2019_SCN_bioreactor_t3_planktonic_scaffold_15423 Species: Rubinisphaera brasiliensis (50%)	2	1211 bp	54.25	6.07	63.42

Displaying items 901-950 of 1189 in total

2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

2019_SCN_bioreactor_t3_planktonic_Planctomycetales_54_6

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

2019_SCN_bioreactor_t3_planktonic_Planctomycetales_54_6

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

Merge with other organism

Processing

Terms of Service

Search Help