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2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

2019_SCN_bioreactor_t3_planktonic_Planctomycetales_54_6
In projects: 2019_SCN_bioreactor_t3_planktonic  |  SCN_ET-SeqDB_Dereplicated  |  SCN_92

Consensus taxonomy: Planctomycetales  →  Planctomycetia  →  Planctomycetes  →  Bacteria

Metagenomic Context

Parent: 2019_SCN_bioreactor_t3_planktonic_UNK

Properties

Avg. coverage: 6.13 Longest contig: 30.70 Kbp Bin length: 5.23 Mbp GC content: 54.48 %
Contigs count: 1189 Features count: 4827 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Displaying items 851-900 of 1189 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
2019_SCN_bioreactor_t3_planktonic_scaffold_49081
Species: Rhodopirellula sallentina (50%)
2 1782 bp 50.45 6.82 60.27
2019_SCN_bioreactor_t3_planktonic_scaffold_105786
Species: Gimesia maris (50%)
2 1175 bp 51.83 5.36 42.64
2019_SCN_bioreactor_t3_planktonic_scaffold_3657
Species: Planctopirus limnophila (50%)
2 1846 bp 51.35 4.71 78.66
2019_SCN_bioreactor_t3_planktonic_scaffold_46899
Species: Singulisphaera acidiphila (50%)
2 1039 bp 55.15 6.21 67.57
2019_SCN_bioreactor_t3_planktonic_scaffold_47840
Species: RBG_16_Planctomycetes_55_9_curated (50%)
2 1994 bp 53.21 6.39 96.74
2019_SCN_bioreactor_t3_planktonic_scaffold_36150
Species: RBG_16_Planctomycetes_64_10_curated (50%)
2 1445 bp 55.57 5.71 69.97
2019_SCN_bioreactor_t3_planktonic_scaffold_69768
Species: Planctopirus limnophila (100%)
2 1914 bp 54.02 4.62 85.27
2019_SCN_bioreactor_t3_planktonic_scaffold_24420
Species: Planctopirus limnophila (100%)
2 2325 bp 55.23 6.39 91.10
2019_SCN_bioreactor_t3_planktonic_scaffold_77029
Species: Isosphaera pallida (50%)
2 2060 bp 55.63 5.83 98.30
2019_SCN_bioreactor_t3_planktonic_scaffold_129705
Species: Singulisphaera acidiphila (100%)
2 2247 bp 54.47 5.47 84.11
2019_SCN_bioreactor_t3_planktonic_scaffold_51573
Species: Singulisphaera acidiphila (50%)
2 1636 bp 54.58 5.59 89.12
2019_SCN_bioreactor_t3_planktonic_scaffold_136962
Species: Rubinisphaera brasiliensis (50%)
2 1537 bp 55.37 6.15 66.17
2019_SCN_bioreactor_t3_planktonic_scaffold_60098
Species: Gimesia maris (50%)
2 1348 bp 53.34 4.78 68.77
2019_SCN_bioreactor_t3_planktonic_scaffold_45657
Species: Singulisphaera acidiphila (50%)
2 2171 bp 57.53 5.60 89.54
2019_SCN_bioreactor_t3_planktonic_scaffold_109892
Species: Isosphaera pallida (50%)
2 1282 bp 54.60 4.91 94.77
2019_SCN_bioreactor_t3_planktonic_scaffold_102672
Species: Singulisphaera acidiphila (50%)
2 2063 bp 55.55 5.96 74.89
2019_SCN_bioreactor_t3_planktonic_scaffold_30544
Species: Rhodopirellula maiorica (50%)
2 1680 bp 53.81 4.73 80.36
2019_SCN_bioreactor_t3_planktonic_scaffold_26708
Species: Singulisphaera acidiphila (50%)
2 2119 bp 51.86 7.43 64.28
2019_SCN_bioreactor_t3_planktonic_scaffold_19742
Species: Gimesia maris (50%)
2 1457 bp 52.30 6.38 93.89
2019_SCN_bioreactor_t3_planktonic_scaffold_30560
Species: Planctopirus limnophila (50%)
2 1557 bp 54.46 5.59 93.83
2019_SCN_bioreactor_t3_planktonic_scaffold_129734
Species: Gimesia maris (50%)
2 1019 bp 55.45 3.97 51.23
2019_SCN_bioreactor_t3_planktonic_scaffold_46941
Species: Planctopirus limnophila (50%)
2 1029 bp 51.70 5.83 58.89
2019_SCN_bioreactor_t3_planktonic_scaffold_107142
Species: Planctopirus limnophila (50%)
2 1766 bp 55.55 6.80 89.01
2019_SCN_bioreactor_t3_planktonic_scaffold_100127
Species: Rhodopirellula europaea (100%)
2 2899 bp 54.57 5.80 99.55
2019_SCN_bioreactor_t3_planktonic_scaffold_50391
Species: Planctopirus limnophila (50%)
2 1214 bp 56.01 4.45 74.38
2019_SCN_bioreactor_t3_planktonic_scaffold_97004
Species: Planctopirus limnophila (50%)
2 3235 bp 53.91 6.17 81.33
2019_SCN_bioreactor_t3_planktonic_scaffold_18547
Species: Rhodopirellula baltica (50%)
2 1825 bp 54.96 5.26 90.74
2019_SCN_bioreactor_t3_planktonic_scaffold_75824
Species: Planctopirus limnophila (50%)
2 1692 bp 53.78 6.65 55.14
2019_SCN_bioreactor_t3_planktonic_scaffold_68508
Species: Gimesia maris (50%)
2 1326 bp 55.96 4.98 83.26
2019_SCN_bioreactor_t3_planktonic_scaffold_45690
Species: Planctopirus limnophila (50%)
2 1023 bp 55.13 5.43 94.43
2019_SCN_bioreactor_t3_planktonic_scaffold_74537
Species: Singulisphaera acidiphila (50%)
2 1547 bp 56.17 6.30 96.38
2019_SCN_bioreactor_t3_planktonic_scaffold_91885
Species: Planctopirus limnophila (50%)
2 2229 bp 52.94 5.99 67.29
2019_SCN_bioreactor_t3_planktonic_scaffold_18575
Species: Gimesia maris (50%)
2 1232 bp 51.14 4.50 58.69
2019_SCN_bioreactor_t3_planktonic_scaffold_4762
Species: Blastopirellula marina (50%)
2 1852 bp 54.54 5.26 96.54
2019_SCN_bioreactor_t3_planktonic_scaffold_98826
Species: Pirellula staleyi (50%)
2 1219 bp 55.29 7.51 74.82
2019_SCN_bioreactor_t3_planktonic_scaffold_126985
Species: Planctopirus limnophila (50%)
2 1357 bp 53.28 4.86 76.27
2019_SCN_bioreactor_t3_planktonic_scaffold_41493
Species: Planctopirus limnophila (100%)
2 1580 bp 56.20 5.98 97.03
2019_SCN_bioreactor_t3_planktonic_scaffold_79741
Species: Gimesia maris (50%)
2 1379 bp 52.07 6.96 65.26
2019_SCN_bioreactor_t3_planktonic_scaffold_97045
Species: Blastopirellula marina (50%)
2 1742 bp 54.36 7.15 88.17
2019_SCN_bioreactor_t3_planktonic_scaffold_112675
Species: Gimesia maris (50%)
2 1366 bp 49.93 7.25 52.49
2019_SCN_bioreactor_t3_planktonic_scaffold_22132
Species: Planctopirus limnophila (50%)
2 1555 bp 53.57 6.66 94.73
2019_SCN_bioreactor_t3_planktonic_scaffold_41497
Species: Pirellula staleyi (50%)
2 1434 bp 53.97 4.71 100.21
2019_SCN_bioreactor_t3_planktonic_scaffold_81115
Species: Planctopirus limnophila (50%)
2 1250 bp 56.24 4.92 96.72
2019_SCN_bioreactor_t3_planktonic_scaffold_17615
Species: Singulisphaera acidiphila (100%)
2 2999 bp 56.62 6.30 95.43
2019_SCN_bioreactor_t3_planktonic_scaffold_128409
Species: Rubinisphaera brasiliensis (50%)
2 2392 bp 51.63 7.21 92.18
2019_SCN_bioreactor_t3_planktonic_scaffold_77178
Species: Planctopirus limnophila (100%)
2 1699 bp 51.97 4.68 75.04
2019_SCN_bioreactor_t3_planktonic_scaffold_8323
Species: Planctopirus limnophila (50%)
2 1396 bp 54.44 5.48 96.28
2019_SCN_bioreactor_t3_planktonic_scaffold_45745
Species: Singulisphaera acidiphila (50%)
2 2871 bp 53.71 6.17 70.43
2019_SCN_bioreactor_t3_planktonic_scaffold_118351
Species: Planctopirus limnophila (100%)
2 1206 bp 56.30 5.85 89.80
2019_SCN_bioreactor_t3_planktonic_scaffold_86220
Species: Gimesia maris (50%)
2 1365 bp 55.09 6.15 100.22
Displaying items 851-900 of 1189 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.