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2019_SCN_bioreactor_t3_planktonic_Planctomycetes_54_6

2019_SCN_bioreactor_t3_planktonic_Planctomycetales_54_6
In projects: 2019_SCN_bioreactor_t3_planktonic  |  SCN_ET-SeqDB_Dereplicated  |  SCN_92

Consensus taxonomy: Planctomycetales  →  Planctomycetia  →  Planctomycetes  →  Bacteria

Metagenomic Context

Parent: 2019_SCN_bioreactor_t3_planktonic_UNK

Properties

Avg. coverage: 6.13 Longest contig: 30.70 Kbp Bin length: 5.23 Mbp GC content: 54.48 %
Contigs count: 1189 Features count: 4827 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 46 / 55 BSCG 44 / 51 MC: 2 ASCG 12 / 38 MC: 3
Displaying items 801-850 of 1189 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
2019_SCN_bioreactor_t3_planktonic_scaffold_24231
Species: Gimesia maris (50%)
2 1609 bp 52.77 7.09 82.60
2019_SCN_bioreactor_t3_planktonic_scaffold_111080
Species: Planctopirus limnophila (50%)
2 1910 bp 56.23 5.50 92.98
2019_SCN_bioreactor_t3_planktonic_scaffold_87184
Species: Planctopirus limnophila (50%)
2 1718 bp 50.23 5.76 61.12
2019_SCN_bioreactor_t3_planktonic_scaffold_85774
Species: RBG_16_Planctomycetes_64_12_curated (50%)
2 1961 bp 52.93 6.27 77.56
2019_SCN_bioreactor_t3_planktonic_scaffold_24243
Species: Gimesia maris (50%)
2 1526 bp 53.08 6.98 95.35
2019_SCN_bioreactor_t3_planktonic_scaffold_26512
Species: Planctopirus limnophila (50%)
2 1075 bp 52.65 5.58 55.81
2019_SCN_bioreactor_t3_planktonic_scaffold_95505
Species: Planctopirus limnophila (50%)
2 1837 bp 53.57 5.80 78.72
2019_SCN_bioreactor_t3_planktonic_scaffold_23026
Species: Planctopirus limnophila (50%)
2 1700 bp 53.94 5.29 83.65
2019_SCN_bioreactor_t3_planktonic_scaffold_115075
Species: Planctopirus limnophila (50%)
2 1522 bp 54.27 6.41 77.46
2019_SCN_bioreactor_t3_planktonic_scaffold_124016
Species: Planctopirus limnophila (50%)
2 1442 bp 55.96 5.10 93.20
2019_SCN_bioreactor_t3_planktonic_scaffold_109658
Species: RBG_16_Planctomycetes_64_12_curated (50%)
2 1494 bp 56.29 7.03 89.36
2019_SCN_bioreactor_t3_planktonic_scaffold_136728
Species: Singulisphaera acidiphila (50%)
2 1356 bp 56.34 5.42 112.17
2019_SCN_bioreactor_t3_planktonic_scaffold_55121
Species: Planctopirus limnophila (50%)
2 1836 bp 54.63 4.49 81.37
2019_SCN_bioreactor_t3_planktonic_scaffold_30357
Species: Singulisphaera acidiphila (50%)
2 1823 bp 56.61 5.92 92.65
2019_SCN_bioreactor_t3_planktonic_scaffold_74292
Species: Planctopirus limnophila (50%)
2 1493 bp 52.51 6.03 93.03
2019_SCN_bioreactor_t3_planktonic_scaffold_122931
Species: Gimesia maris (50%)
2 1298 bp 56.09 4.51 93.14
2019_SCN_bioreactor_t3_planktonic_scaffold_10548
Species: Planctopirus limnophila (50%)
2 2688 bp 54.46 5.92 98.77
2019_SCN_bioreactor_t3_planktonic_scaffold_126704
Species: Planctopirus limnophila (50%)
2 1222 bp 57.61 6.75 83.47
2019_SCN_bioreactor_t3_planktonic_scaffold_101233
Species: Blastopirellula marina (50%)
2 1183 bp 57.73 5.71 97.63
2019_SCN_bioreactor_t3_planktonic_scaffold_102487
Species: Planctopirus limnophila (50%)
2 1500 bp 53.67 5.00 96.00
2019_SCN_bioreactor_t3_planktonic_scaffold_140129
Species: Planctopirus limnophila (50%)
2 3866 bp 53.54 5.51 68.91
2019_SCN_bioreactor_t3_planktonic_scaffold_135579
Species: Gimesia maris (100%)
2 1310 bp 54.20 7.33 96.64
2019_SCN_bioreactor_t3_planktonic_scaffold_34756
Species: Planctopirus limnophila (100%)
2 1127 bp 55.10 4.26 92.64
2019_SCN_bioreactor_t3_planktonic_scaffold_59983
Species: Planctopirus limnophila (50%)
2 1766 bp 55.32 5.86 97.51
2019_SCN_bioreactor_t3_planktonic_scaffold_118969
Species: Gimesia maris (100%)
2 1328 bp 57.98 5.76 102.33
2019_SCN_bioreactor_t3_planktonic_scaffold_24305
Species: Gimesia maris (50%)
2 5296 bp 57.33 6.17 91.65
2019_SCN_bioreactor_t3_planktonic_scaffold_11782
Species: Gimesia maris (50%)
2 2350 bp 55.40 7.15 95.62
2019_SCN_bioreactor_t3_planktonic_scaffold_102957
Species: Singulisphaera acidiphila (50%)
2 1796 bp 55.62 5.01 76.00
2019_SCN_bioreactor_t3_planktonic_scaffold_138313
Species: Singulisphaera acidiphila (50%)
2 1544 bp 53.17 6.22 46.83
2019_SCN_bioreactor_t3_planktonic_scaffold_13853
Species: Rubinisphaera brasiliensis (100%)
2 3067 bp 55.17 6.02 76.59
2019_SCN_bioreactor_t3_planktonic_scaffold_3569
Species: Rubinisphaera brasiliensis (50%)
2 2121 bp 53.70 5.37 87.98
2019_SCN_bioreactor_t3_planktonic_scaffold_135610
Species: Planctopirus limnophila (50%)
2 1764 bp 55.39 6.80 79.42
2019_SCN_bioreactor_t3_planktonic_scaffold_78291
Species: Gimesia maris (50%)
2 1770 bp 56.21 5.42 91.02
2019_SCN_bioreactor_t3_planktonic_scaffold_17385
Species: Blastopirellula marina (50%)
2 8022 bp 53.73 6.26 99.81
2019_SCN_bioreactor_t3_planktonic_scaffold_109767
Species: Pirellula staleyi (100%)
2 4171 bp 55.26 6.83 73.08
2019_SCN_bioreactor_t3_planktonic_scaffold_106998
Species: Pirellula staleyi (50%)
2 1114 bp 53.59 5.66 91.29
2019_SCN_bioreactor_t3_planktonic_scaffold_23184
Species: Gimesia maris (50%)
2 1227 bp 54.52 5.50 49.63
2019_SCN_bioreactor_t3_planktonic_scaffold_9525
Species: Gimesia maris (50%)
2 1553 bp 54.54 5.12 92.53
2019_SCN_bioreactor_t3_planktonic_scaffold_71052
Species: Rhodopirellula europaea (50%)
2 3555 bp 51.39 6.37 85.57
2019_SCN_bioreactor_t3_planktonic_scaffold_37538
Species: Rubinisphaera brasiliensis (50%)
2 1398 bp 51.65 4.72 62.88
2019_SCN_bioreactor_t3_planktonic_scaffold_49032
Species: Candidatus Brocadia sinica (50%)
2 1960 bp 53.83 6.43 80.20
2019_SCN_bioreactor_t3_planktonic_scaffold_41350
Species: Singulisphaera acidiphila (50%)
2 1458 bp 55.76 6.17 96.91
2019_SCN_bioreactor_t3_planktonic_scaffold_98712
Species: Planctopirus limnophila (50%)
2 1038 bp 52.60 6.21 70.52
2019_SCN_bioreactor_t3_planktonic_scaffold_34805
Species: Planctopirus limnophila (50%)
2 1870 bp 55.45 4.89 88.72
2019_SCN_bioreactor_t3_planktonic_scaffold_20803
Species: Planctopirus limnophila (50%)
2 1002 bp 50.60 3.59 101.80
2019_SCN_bioreactor_t3_planktonic_scaffold_84629
Species: Gimesia maris (50%)
2 1846 bp 54.44 5.12 81.42
2019_SCN_bioreactor_t3_planktonic_scaffold_128165
Species: Planctopirus limnophila (50%)
2 2286 bp 54.55 6.50 83.07
2019_SCN_bioreactor_t3_planktonic_scaffold_105779
Species: Planctopirus limnophila (50%)
2 1217 bp 54.64 3.70 79.87
2019_SCN_bioreactor_t3_planktonic_scaffold_31757
Species: Rubinisphaera brasiliensis (50%)
2 2322 bp 54.91 7.69 89.66
2019_SCN_bioreactor_t3_planktonic_scaffold_32533
Species: Rhodopirellula maiorica (50%)
2 2136 bp 55.20 5.69 102.25
Displaying items 801-850 of 1189 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.