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cn_combo_scaffold_357

Alias: AGR20_18

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Displaying items 1-30 of 95 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_357_1
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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322..690
DNA (369bp) protein (123aa)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit
NADH-quinone oxidoreductase subunit A n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QTM5_9RHIZ
NADH-quinone oxidoreductase subunit A
cn_combo_scaffold_357_2
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

681..1262
DNA (582bp) protein (194aa)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit
NADH-quinone oxidoreductase subunit B n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PC73_9RHIZ
NDH-1 subunit B
cn_combo_scaffold_357_3
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1281..1883
DNA (603bp) protein (201aa)
NADH-quinone oxidoreductase subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01357};; NADH dehydrogenase I subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; NDH-1 subunit
NADH-quinone oxidoreductase subunit C n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q421_9RHIZ
NDH-1 subunit C rbh
cn_combo_scaffold_357_4
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1901..3091
DNA (1191bp) protein (397aa)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit
NADH-quinone oxidoreductase subunit D n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QBR7_9RHIZ
NDH-1 subunit D rbh
cn_combo_scaffold_357_5
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3091..3333
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QTN2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF58497.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
Hypothetical signal peptide protein
cn_combo_scaffold_357_6
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3352..4476
DNA (1125bp) protein (375aa)
NADH dehydrogenase subunit E {ECO:0000313|EMBL:EKF58498.1}; EC=1.6.5.3 {ECO:0000313|EMBL:EKF58498.1};; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae;
NADH dehydrogenase subunit E n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PC80_9RHIZ
nuoE2; NADH dehydrogenase I chain E rbh
cn_combo_scaffold_357_7
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4488..5792
DNA (1305bp) protein (435aa)
NADH dehydrogenase I subunit F {ECO:0000313|EMBL:EKF58499.1}; EC=1.6.99.5 {ECO:0000313|EMBL:EKF58499.1};; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiacea
nuoF1; NADH-quinone oxidoreductase subunit F 1 (EC:1.6.99.5) rbh
NADH dehydrogenase I subunit F n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q426_9RHIZ
cn_combo_scaffold_357_8
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5805..6569
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q0A7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF58500.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
Hypothetical protein
cn_combo_scaffold_357_9
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6712..8793
DNA (2082bp) protein (694aa)
NADH dehydrogenase subunit G {ECO:0000313|EMBL:EKF58501.1}; EC=1.6.99.5 {ECO:0000313|EMBL:EKF58501.1};; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae;
NADH dehydrogenase subunit G n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QBS2_9RHIZ
NADH dehydrogenase subunit G
cn_combo_scaffold_357_10
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8806..9849
DNA (1044bp) protein (348aa)
NADH-quinone oxidoreductase subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01350};; NADH dehydrogenase I subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; NDH-1 subunit
NADH-quinone oxidoreductase subunit H n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QTN7_9RHIZ
NADH dehydrogenase subunit H rbh
cn_combo_scaffold_357_11
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9889..10377
DNA (489bp) protein (163aa)
NADH-quinone oxidoreductase subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01351};; NADH dehydrogenase I subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; NDH-1 subunit
NADH-quinone oxidoreductase subunit I n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PC84_9RHIZ
NDH-1 subunit I rbh
cn_combo_scaffold_357_12
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10529..11143
DNA (615bp) protein (205aa)
NADH:ubiquinone oxidoreductase subunit J {ECO:0000313|EMBL:EKF58504.1}; EC=1.6.99.5 {ECO:0000313|EMBL:EKF58504.1};; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; R
NADH:ubiquinone oxidoreductase subunit J n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q430_9RHIZ
nuoJ; NADH dehydrogenase subunit J rbh
cn_combo_scaffold_357_13
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11172..11480
DNA (309bp) protein (103aa)
NADH-quinone oxidoreductase subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01456};; NADH dehydrogenase I subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; NDH-1 subunit
nuoK; NADH-quinone oxidoreductase chain K (NADH dehydrogenase I, chain K) (NDH-1, chain K) (EC:1.6.99.5 1.6.5.3)
NADH-quinone oxidoreductase subunit K n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q0B1_9RHIZ
cn_combo_scaffold_357_14
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11488..13482
DNA (1995bp) protein (665aa)
nuoL; NADH-quinone oxidoreductase chain L (NADH dehydrogenase I, chain L) (NDH-1, chain L) (EC:1.6.99.5 1.6.5.3)
NADH:ubiquinone oxidoreductase subunit L n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QBT0_9RHIZ
NADH:ubiquinone oxidoreductase subunit L {ECO:0000313|EMBL:EKF58506.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
cn_combo_scaffold_357_15
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13482..14993
DNA (1512bp) protein (504aa)
NADH:ubiquinone oxidoreductase subunit M {ECO:0000313|EMBL:EKF58507.1}; EC=1.6.99.5 {ECO:0000313|EMBL:EKF58507.1};; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; R
NADH:ubiquinone oxidoreductase subunit M n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QTP5_9RHIZ
nuoM; NADH dehydrogenase subunit M rbh
cn_combo_scaffold_357_16
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15012..16457
DNA (1446bp) protein (482aa)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit
NADH-quinone oxidoreductase subunit N n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PC90_9RHIZ
nuoN2; NADH dehydrogenase I chain N
cn_combo_scaffold_357_17
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16454..17221
DNA (768bp) protein (256aa)
birA; biotin transcriptional regulator bifunctional protein (EC:6.3.4.15)
Biotin--acetyl-CoA-carboxylase ligase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q434_9RHIZ
Biotin--acetyl-CoA-carboxylase ligase {ECO:0000313|EMBL:EKF58509.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agr
cn_combo_scaffold_357_18
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17240..18907
DNA (1668bp) protein (556aa)
Metal dependent hydrolase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q0B4_9RHIZ
Metal dependent hydrolase {ECO:0000313|EMBL:EKF58510.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;
beta-lactamase rbh
cn_combo_scaffold_357_19
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18963..19367
DNA (405bp) protein (135aa)
methylmalonyl-CoA epimerase protein (EC:5.1.99.1)
Methylmalonyl-CoA epimerase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QBT8_9RHIZ
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:EKF58511.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium
cn_combo_scaffold_357_20
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19523..19801
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QTQ0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF58512.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
hypothetical protein
cn_combo_scaffold_357_21
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20304..21626
DNA (1323bp) protein (441aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01570, ECO:0000256|SAAS:SAAS00010700}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01570, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:000025
proS; prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PC96_9RHIZ
cn_combo_scaffold_357_22
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21691..22998
DNA (1308bp) protein (436aa)
ABC transporter permease n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q439_9RHIZ
ABC transporter permease {ECO:0000313|EMBL:EKF58514.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
lolC; lipoprotein-releasing system transmembrane protein LolC
cn_combo_scaffold_357_23
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23013..23702
DNA (690bp) protein (230aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobact
ABC transporter ATP-binding protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q0B7_9RHIZ
lolD-1; lipoprotein-releasing system ATP-binding protein LolD 1
cn_combo_scaffold_357_24
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24045..27545
DNA (3501bp) protein (1167aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiacea
DNA polymerase III subunit alpha n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QBU5_9RHIZ
dnaE; DNA polymerase III subunit alpha rbh
cn_combo_scaffold_357_25
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27549..28781)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PCA1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF58518.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
conserved exported protein of unknown function
cn_combo_scaffold_357_26
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28921..29715)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q443_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF58519.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
putative transmembrane protein
cn_combo_scaffold_357_27
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29724..31007)
DNA (1284bp) protein (428aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1156935 species="Bacteria; Proteobacteria; Al
DNA polymerase IV n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q0C2_9RHIZ
dinP; DNA polymerase IV rbh
cn_combo_scaffold_357_28
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31098..31733)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QBV2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF58521.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
hypothetical protein
cn_combo_scaffold_357_29
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31733..32026)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QTR4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF58522.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
Hypothetical protein
cn_combo_scaffold_357_30
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32165..32536
DNA (372bp) protein (124aa)
Two-component response regulator protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PCA9_9RHIZ
Two-component response regulator protein {ECO:0000313|EMBL:EKF58523.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group;
divK; polar-differentiation response regulator DivK
Displaying items 1-30 of 95 in total

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