ggKbase home page

cn_combo_scaffold_17_5

Organism: CN-SCN_Agrobacterium_19x

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(9133..12594)

Top 3 Functional Annotations

Value Algorithm Source
Ti-type conjugative transfer relaxase TraA n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q7X9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 84.1
  • Coverage: 999.99
  • Bit_score: 1877
  • Evalue 0.0
Ti-type conjugative transfer relaxase TraA {ECO:0000313|EMBL:EKF59829.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group similarity UNIPROT
DB: UniProtKB
  • Identity: 84.1
  • Coverage: 999.99
  • Bit_score: 1877
  • Evalue 0.0
traA; Ti-type conjugative transfer relaxase TraA similarity KEGG
DB: KEGG
  • Identity: 63.9
  • Coverage: 999.99
  • Bit_score: 1352
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Agrobacterium albertimagni → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3462
ATGGCGATCTACCATTGCAGCATGAAGCCGGTGAGCCGCTCGGGCGGCCGCAGTGCCGTGGCCGCAATCGCCTATCGAACGGCAAGCCGGATCGTCAATGAGCGTGACGGCCTAGTGCATGACTTCACAGCCAAGGCCGGCGTCGTGCATACAGAGATCGTGCTTCCCGAAGGCTCGCAGGCGAAGTGGGCGCTCGACAGATCTGCGCTGTGGAATGCGGTTGAATTTGCCGAGAAGCGCAAGGATGCACGGCTCGCACGCGAGTTCGAAGTGGCGCTTCCGCATGAGCTGAATGCGGGAGAGAGGTTGGCGCTGGTTCGTGCCTTTGCCCGTGATCTTGCAGACCGACATGGGGCAGCTGTCGACTTTGCCATTCACGCGCCAGGCGGTGACGGCGACATCCGCAACAGCCATGCCCATGTGATGATGACGACGCGCAAGGTCGAGGCATCAGGACTTGGCGAGAAGACGCTGATCGAGCGAGAGAACAAGTGGCTGTTGAACCATGACCTGCCGACGTCACAGATGCAGTTGCGCGAGATCCGCCAGGCCTGGGAGATGCATGCCAACCGGGCACTGATGCTGGCGGGCCATGAGGTGAGGATCGATCATCGCTCGCACCTTGAACGTGGGCTGGAGATCGAGCCGACCGAGCACATGGGTGTGCATGCCTCCGAGATCGACCGGCGCGGCGGGGCTGTCTCCCGCACACGGATCGATGAGGAGGCGGCACGGCGCAATGCCGAGTTGATCCGCGAGAAACCGGAACAGGTACTGACCCTCATTACCGGCGAGAAGAGCGTCTTCGATCGATACGATGTCGCGAGGGCACTACACCGCTACATCGACGATGCCGGCCAGTTCCGCAATGCGTTCGCCGCGGTGATGGGCTCGAAGGCTCTGGTGGAATTGCGCAAGGAAACCGGTGGTGAGCTTGCCCGCTACACAACGCGGGAGATGCTGGAGATCGAACACGCCATGGCCCTGCGTGCGGATCGAATGAGCCGCCACTCATTTACTCAAGTCGGCTCGCACGCGTCCCATGATGGGAGTGGCCATGGCGTCGACCGACATCATGTCGACCGTGCCTTGAGGCTACAGGACGAGGCCATCAGGGCAATGACAGATGGTTCCAGCTCGCGGACAGTTGAACAGCGAACACGAACTGTCCCTTGGGTCACGTCCCGCTACACTCCCCCAGGAGGACTGAGCGAAGAGCAGCGGCTTGCGGTCCGGCATGTCACCGGTCCCGAGCGCATTGCCGCGGTCATCGGCTTCGCGGGTGCCGGCAAGTCGACCATGCTGGCAGCAGCCCGCACCGCCTGGGAAGCGCAGGGTTACCGGGTGCACGGGGCAGCACTCGCCGGCAAGGCAGCGGAAGGGTTGGAGGAATCCTCCGGCATAACCTCCCGCACGCTCGCCTCCTGGGAGCACAGCTGGGAGGCGGGAAGGGCGGAGCTCCAGTCTGGTGACATCCTCGTCATTGACGAAGCCGGCATGATCGGCAGTCGCCAGCTTGGCAGATTTGTCGAAGAGGTCGAGCGACACGGTGCAAAGCTGGTGTTGGTTGGCGATCACGAACAGCTGCAGGCGATCGGGGCTGGATCACCGTTCCGGGCGATTGCCGAGCGGATTGGTGCGGTCGAACTCTCGGAGATTCGCCGACAGAAAGAGGAGTGGCAGCGGCAGGCCTCGATTGCCTTTGCCACGCATCGAACAAGCGAGGGGCTGTCCGCCTATGCCGAGCGGGGACAGGTGCATTTTGCCGAAAACCGGGAGGGTGCACGCGAAGCGCTGGTGCGGGATTATCTCGCCGATCGGGATTCACGACCGGAGGGTTCACGTATTGCGCTGGCGCATCGGCGTGCTGATGTCCGGGCAATCAATGATGCGATCCGATCAGCATTGCAAGGGCGGGGAGATCTGGCGAAAGCCGATCAGGCGACTGGCGCAAGAGAGCCGGGGCAGGGCATTCAGCAAGGACAAGAGCAATGGCAGGGGGCGGACAGCGTCGACCGGGAGATTGTCTATCAGACGAATGACGGCAGGCGCGGCTTTGCGCCAGGCGATCGCATTGTGCTCCTCGAGAACAACCGGGATCTTGGCGTGAAGAACGGGATGCTGGGGACGGTGACTGCCGTCGAGCCTGACGCAATACAGCTGAGGCTCGACGGCGCAGGGCCGAGCAGGGCCCGTGTCATCTCAATACCGGTCGGAAGTTACCAAAGCTTTGACCACGGCTACGCCACGACGATCCACAAGGCGCAAGGGGCAACGGTCGATCGTGCCTTCGTCATGGCATCCGCCACCATGGATCGGCATCTGACCTATGTCGCAATGACCAGGCACCGGGAGGCAGTCACCCTTTATGCCGGGCGCGATGAGCTGAAGGACATGAAGGCACTGTCGGCGAGCCTCGGTCGATCCGGCGCCAAGGAGACGGTGCTGGATTATACCGATGCGTTCGCCGCTCGGCGCGGGCTCGGGGAGGGCATTGGTGTCACGAGCGAGATTGTGCTCGGCCCAACGCCACAACGGGATGGGGCACAGCGGGCTGACGATCGGCTGGCGGCTCACTACGGCGCTTTGGGTGAGCGCGTTCGCTCGCCGGCCGATCGGCAGCCCTTCGAGAAGACGGCTGGGGTAGAGATAGATCGGGCGCATGGGATAGAAAATGGTCCGTCAGCTGAGGCGCAAGACGTCAAGGTCAAGCCGCTTGTGCCGGTGATCACCCACTATTCCCAGACGATCGAGGAGGTGGCGCTGGCAGAGGCATCGCGGCATCTCGAACAGGTACTCGGTGGTGTGCGCTCACTTGGGCGCAGTGTGTTTGCCAATCCAGAACAATTTGCCGGACTGGTCGCAAAGACGCTCCGCGAGCGCAACGGGGATGTCGCTGATCTGGCTGAGGCGGTGGCGAAACGTCCGGAGGCATTCGGTGCGCTGCTTGGCAAGGCTGGGCTCCTGGGCGACAACCGGGAGCGTAGGCAAGCGCGTCAAATGGCTGGCCCGTTAGGTGCCCATGTCGTACGTGCGGCACGCCACTGGACGAGGCGATATGAGGAGGCGGCAAAATCCGAACAGTGGAAGCGGGAGAAACAGGATGTCATCGAGGTGCCGGGCTTAAGCGCCCAGAGTGAGATGATACTTAGGCAGTTGGATGGACTCGAGCGTGCGGAGAAGCCTGCGTTTCTGGAGACGCTTGTCGGGACGCCGGAGGGGCGGCGGGCGCTTGAGGAGGCGGAGGCGGTCGCCGATGCGATGAGGCAGCGGTTTGGGACCGACGATCTGCGCAACAAGAACCTGGCGGCATTGACGAGGGGGCAGGCGGACAGAGTGGATCTAGAGCGATTGGCCGAGGTTGCGCGGATCACTTATCGCGCGAAGACGGCGGAGATGTTCAAGCAGCAGGAACTGGTGAGGAAGGAAAGGCAGGGGCTTGGGTTGGGTTTGGGTATGTGA
PROTEIN sequence
Length: 1154
MAIYHCSMKPVSRSGGRSAVAAIAYRTASRIVNERDGLVHDFTAKAGVVHTEIVLPEGSQAKWALDRSALWNAVEFAEKRKDARLAREFEVALPHELNAGERLALVRAFARDLADRHGAAVDFAIHAPGGDGDIRNSHAHVMMTTRKVEASGLGEKTLIERENKWLLNHDLPTSQMQLREIRQAWEMHANRALMLAGHEVRIDHRSHLERGLEIEPTEHMGVHASEIDRRGGAVSRTRIDEEAARRNAELIREKPEQVLTLITGEKSVFDRYDVARALHRYIDDAGQFRNAFAAVMGSKALVELRKETGGELARYTTREMLEIEHAMALRADRMSRHSFTQVGSHASHDGSGHGVDRHHVDRALRLQDEAIRAMTDGSSSRTVEQRTRTVPWVTSRYTPPGGLSEEQRLAVRHVTGPERIAAVIGFAGAGKSTMLAAARTAWEAQGYRVHGAALAGKAAEGLEESSGITSRTLASWEHSWEAGRAELQSGDILVIDEAGMIGSRQLGRFVEEVERHGAKLVLVGDHEQLQAIGAGSPFRAIAERIGAVELSEIRRQKEEWQRQASIAFATHRTSEGLSAYAERGQVHFAENREGAREALVRDYLADRDSRPEGSRIALAHRRADVRAINDAIRSALQGRGDLAKADQATGAREPGQGIQQGQEQWQGADSVDREIVYQTNDGRRGFAPGDRIVLLENNRDLGVKNGMLGTVTAVEPDAIQLRLDGAGPSRARVISIPVGSYQSFDHGYATTIHKAQGATVDRAFVMASATMDRHLTYVAMTRHREAVTLYAGRDELKDMKALSASLGRSGAKETVLDYTDAFAARRGLGEGIGVTSEIVLGPTPQRDGAQRADDRLAAHYGALGERVRSPADRQPFEKTAGVEIDRAHGIENGPSAEAQDVKVKPLVPVITHYSQTIEEVALAEASRHLEQVLGGVRSLGRSVFANPEQFAGLVAKTLRERNGDVADLAEAVAKRPEAFGALLGKAGLLGDNRERRQARQMAGPLGAHVVRAARHWTRRYEEAAKSEQWKREKQDVIEVPGLSAQSEMILRQLDGLERAEKPAFLETLVGTPEGRRALEEAEAVADAMRQRFGTDDLRNKNLAALTRGQADRVDLERLAEVARITYRAKTAEMFKQQELVRKERQGLGLGLGM*