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cn_combo_scaffold_17

Alias: AGR20_4

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Displaying items 1-30 of 357 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_17_1
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..575
DNA (573bp) protein (191aa)
modification methylase n=1 Tax=Rhizobium sp. JGI 0001005-H05 RepID=UPI0003629FBE
Modification methylase {ECO:0000313|EMBL:KGB82759.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. NI22
DNA-cytosine methyltransferase
cn_combo_scaffold_17_2
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(591..5711)
DNA (5121bp) protein (1707aa)
DNA translocase FtsK n=1 Tax=Streptomyces globisporus RepID=UPI00029B26A4
DNA translocase FtsK Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
DNA translocase FtsK
cn_combo_scaffold_17_3
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5724..7010)
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Streptomyces globisporus RepID=UPI00029A327B
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
cn_combo_scaffold_17_4
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7025..8968)
DNA (1944bp) protein (648aa)
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
cn_combo_scaffold_17_5
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9133..12594)
DNA (3462bp) protein (1154aa)
Ti-type conjugative transfer relaxase TraA n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q7X9_9RHIZ
Ti-type conjugative transfer relaxase TraA {ECO:0000313|EMBL:EKF59829.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group
traA; Ti-type conjugative transfer relaxase TraA rbh
cn_combo_scaffold_17_6
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12794..13111
DNA (318bp) protein (106aa)
Mobilization protein C n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PG33_9RHIZ
Mobilization protein C {ECO:0000313|EMBL:EKF59828.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" s
mobilization protein C
cn_combo_scaffold_17_7
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13108..14709
DNA (1602bp) protein (534aa)
Type IV secretion system-coupling protein virD4 n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QWW5_9RHIZ
Type IV secretion system-coupling protein virD4 {ECO:0000313|EMBL:EKF59827.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium
traG; conjugal transfer protein TraG
cn_combo_scaffold_17_8
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15017..15907)
DNA (891bp) protein (297aa)
LysR family transcriptional regulator n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QVX6_9RHIZ
LysR family transcriptional regulator {ECO:0000313|EMBL:EKF59412.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agr
putative transcriptional regulator, LysR family rbh
cn_combo_scaffold_17_9
unknown

Not on your lists

comp(16593..17408)
DNA (816bp) protein (272aa)

This feature has no annotations

cn_combo_scaffold_17_10
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17510..17932)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q402_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF59880.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
cn_combo_scaffold_17_11
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18091..18342
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QWW8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF59832.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
hypothetical protein
cn_combo_scaffold_17_12
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

18703..19026
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9W7F9_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ16143.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;"
cn_combo_scaffold_17_13
Asticcacaulis benevestitus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19402..19914)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4RQ71_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ93373.1}; TaxID=1121022 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis b
hypothetical protein
cn_combo_scaffold_17_14
Xanthomonas hortorum, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20150..22456
DNA (2307bp) protein (769aa)
Uncharacterized protein n=1 Tax=Xanthomonas hortorum pv. carotae str. M081 RepID=V7ZDV0_9XANT
Uncharacterized protein {ECO:0000313|EMBL:ETC88740.1}; TaxID=863365 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas hortor
hypothetical protein
cn_combo_scaffold_17_15
BJP_08E140C01_Roseovarius_63_250, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23788..24024
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00037B6978
Tax=BJP_08E140C01_Roseovarius_63_250
cn_combo_scaffold_17_16
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24021..25112
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00037DDE85
site-specific recombinase, phage integrase family
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:AEH77510.1}; TaxID=707241 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer g
cn_combo_scaffold_17_trna_7
unknown

Not on your lists

comp(25186..25258)
DNA (73bp)
transferRNA
cn_combo_scaffold_17_17
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25464..25676)
DNA (213bp) protein (71aa)
DNA gyrase inhibitor YacG n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q1Y7_9RHIZ
DNA gyrase inhibitor YacG {ECO:0000256|HAMAP-Rule:MF_00649, ECO:0000256|SAAS:SAAS00085446}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/A
zinc-binding protein
cn_combo_scaffold_17_18
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25679..26299)
DNA (621bp) protein (207aa)
Maf-like protein QWE_19583 n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PYB8_9RHIZ
Maf-like protein QWE_19583 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacter
maf; Maf-like protein
cn_combo_scaffold_17_19
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26338..26556)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=16 Tax=Rhizobiales RepID=IF1_RHIME
infA; translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhi
cn_combo_scaffold_17_20
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26699..27160)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QRT4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF57732.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
putative low molecular weight tyrosine phosphatase protein
cn_combo_scaffold_17_21
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27166..27639)
DNA (474bp) protein (158aa)
UPF0262 protein QWE_19598 n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2P9Z9_9RHIZ
UPF0262 protein QWE_19598 {ECO:0000256|HAMAP-Rule:MF_00678}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacteri
hypothetical protein
cn_combo_scaffold_17_22
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27643..28941)
DNA (1299bp) protein (433aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-R
Histidinol dehydrogenase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q1Z4_9RHIZ
hisD; histidinol dehydrogenase rbh
cn_combo_scaffold_17_23
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29009..29446)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PYC4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF57735.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
hypothetical protein
cn_combo_scaffold_17_24
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29586..30878)
DNA (1293bp) protein (431aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylp
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q9Q1_9RHIZ
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase rbh
cn_combo_scaffold_17_25
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31005..31319)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QRU2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF57737.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
hypothetical protein
cn_combo_scaffold_17_trna_1
unknown

Not on your lists

31474..31545
DNA (72bp)
transferRNA
cn_combo_scaffold_17_26
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31648..32859)
DNA (1212bp) protein (404aa)
6-aminohexanoate-dimer hydrolase (EC:3.5.1.46)
Putative 6-aminohexanoate-dimer hydrolase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I240_9RHIZ
Putative 6-aminohexanoate-dimer hydrolase {ECO:0000313|EMBL:EHK52926.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source=
cn_combo_scaffold_17_27
Halomonas meridiana, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32906..33868
DNA (963bp) protein (321aa)
Transcriptional regulator, AraC family n=1 Tax=Pseudomonas fluorescens Q8r1-96 RepID=I4KKK5_PSEFL
helix-turn-helix domain protein
DNA-binding protein {ECO:0000313|EMBL:KJD18209.1}; TaxID=29570 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas meridiana.;"
cn_combo_scaffold_17_28
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33855..34763)
DNA (909bp) protein (303aa)
Hydrogen peroxide sensing transcriptional regulator protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q202_9RHIZ
Hydrogen peroxide sensing transcriptional regulator protein {ECO:0000313|EMBL:EKF57739.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Ag
LysR family transcriptional regulator
Displaying items 1-30 of 357 in total

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