ggKbase home page

cn_combo_scaffold_17_27

Organism: CN-SCN_Agrobacterium_19x

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 32906..33868

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Pseudomonas fluorescens Q8r1-96 RepID=I4KKK5_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 25.6
  • Coverage: 309.0
  • Bit_score: 93
  • Evalue 3.50e-16
helix-turn-helix domain protein similarity KEGG
DB: KEGG
  • Identity: 30.4
  • Coverage: 312.0
  • Bit_score: 102
  • Evalue 1.60e-19
DNA-binding protein {ECO:0000313|EMBL:KJD18209.1}; TaxID=29570 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas meridiana.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 28.7
  • Coverage: 310.0
  • Bit_score: 94
  • Evalue 3.80e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halomonas meridiana → Halomonas → Oceanospirillales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 963
ATGGGGCACTCTATCCAGGTCCATCCAGGGGATACGCTCAATTATTGGGCAGGAGCTGCGTGGTCCTATCGGAGCCAGGAGTTCGCCGACGTGACCGAGCAGGCCGGCGCCGTCGGAGGATGGCAGATCGCCAGCAAGCAGTTGGGGCGGGGTCGCTATGCGGCGCTCTCGGAAACGCTGTCGATCGGACAGGTCACGATCACGCGCGACCGCATCAATCTTCCGATCGGACAGGAAACGATCAGCCCCGGAGGGCGTGTGTCGCTGTTCTTCCCGCTCCGATCCGAAGGAGGTTGGCGCGTCGATGGCCGGTGTGAGACGGACGCCGTCATAGCCATGCGGCAAGGACTGACCCATTTGCTCGTTGCGCCCGGCAGTGGCAGCGAACTCCTACATGTGGAAATGCCAGCCGCATTGCTCGCTCTCGATACTAAAGAATCCGTCATCCAGTCGAGACGGCTGCGGCCCGAGGATGAATTTCTGCGCGACTGGCTTCTTTGCCTACTCGGTCAGGCGCGAACTGGTGGTGGACTCGACGGATCAGCCGCAGCTGCGCTGGAGGAAGTTCTCCTCATGCGCCTTTCAAGCTGTGCCAGGGCCTTTGCACCGGCGCCAAGCCAGAAGATCAGTCGGTCTGCGGCGATCAATCTTGTAAGCCAAATGGAGCGCAGGCTCCCTGAGGAGGACGATATCCCCGAGACCTACGGAGCGCTCTGCGAACGCTGGTGCCTTGCACAGAGCGAGGTTGCGGCAGCAACGCTCGCCGCATTCGGGCAAGCCCCTGATCGATGGTACCGGATGGCGCGGCTGAACGGCGTTCACCGTGATCTCCGAGCGCGGTCTCGTGGCCTGACCGTGACACGGGCTGCCACGCGCTGGGGCTTCTTTCACCTCGGGCGCTTTTCGGGTGACTATGCCGCCTTCTTCGGCCGCCACCCGCGGGAAACGCTCAAGGCAAACTGA
PROTEIN sequence
Length: 321
MGHSIQVHPGDTLNYWAGAAWSYRSQEFADVTEQAGAVGGWQIASKQLGRGRYAALSETLSIGQVTITRDRINLPIGQETISPGGRVSLFFPLRSEGGWRVDGRCETDAVIAMRQGLTHLLVAPGSGSELLHVEMPAALLALDTKESVIQSRRLRPEDEFLRDWLLCLLGQARTGGGLDGSAAAALEEVLLMRLSSCARAFAPAPSQKISRSAAINLVSQMERRLPEEDDIPETYGALCERWCLAQSEVAAATLAAFGQAPDRWYRMARLNGVHRDLRARSRGLTVTRAATRWGFFHLGRFSGDYAAFFGRHPRETLKAN*