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cn_combo_scaffold_6606_1

Organism: CN-SCN_Agrobacterium_19x

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 225..1202

Top 3 Functional Annotations

Value Algorithm Source
transposase n=1 Tax=Agrobacterium sp. 10MFCol1.1 RepID=UPI000381FF2D similarity UNIREF
DB: UNIREF100
  • Identity: 86.3
  • Coverage: 278.0
  • Bit_score: 493
  • Evalue 1.20e-136
Transposase {ECO:0000313|EMBL:KGD87656.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobiu similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 278.0
  • Bit_score: 525
  • Evalue 4.00e-146
transposase similarity KEGG
DB: KEGG
  • Identity: 81.2
  • Coverage: 325.0
  • Bit_score: 520
  • Evalue 3.40e-145
  • rbh

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Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 978
ATGATGGGATGTCAGGCAGCTCCGGCGCAGCTCTTCTATGACTTCAGCCTTGATGATCATGTTCCTGCTGGCCATCTGCTGCGCGGCATTGATCGACATCTCGATCTTGGGAGAGTGCGGGCGCGGTTGAAGCCGTTCTACAGTGGCACGGGGCGGCCGTCCGTCGATCCGGAACTGATGATGCGGATGCTGATCATCGGCTACTGCATGGGCATCCGCTCCGAGCGGCGGCTGTGTGAAGAGGTCCATCTCAATCTTGCCTACCGCTGGTTCTGCCGGCTCGGTCTGGACGGGAAGGTGCCGGATCATTCCAGCTTCTCCAAGAACCGGCATGGCCGCTTCCGGCAAAGCGACATCTTGCGTCTCATGTTCGAGACGGTGGTGGAACGCTGCCTTGCTGAGAGATTGGTTGGGGCTGAAGGGTTCGCCGTCGATGCTAGCCTGATCGCCGCCGACGCCAACAAGCAACGCTCGGTGCCCGGCGCAGAGTGGGAGCCCAAGGACGAAGCCAGCCGCTCGGTTCGGGAATATCTGTCGGTACTCGATGATGCCGCGTTTGGCGCGGCATCGCCCGTGACACCGAAGTTCATCTCGCCATCCGATCCGGCGGCTCAGTGGACTGGCGCATACAAAGGCCATGCCTTCTTCGCCTATGCCACGAACTACCTGATCGACACCGAACACGGTGTCATTCTCGATGTCGAGGCCACCCGTGCCATTCGCCAGGCCGAGGTCGGTGCGTCCCGGACGATGATCCAGAGAACGGAAGATCGGTTCGGTCTCAAGCCGGAATATGTCGTCGCCGACAGCGCTTATGCTCTGCTGACAACCTTGCCTGGCTCGTCAAGGAAAAGAGGATCGCGCCACACATCCCCGTCTTCGACAAGTCGCAGCGGACCGACGGTACTTTCTCGCGCTCGGACTTCACCTGGGAGGCGGAGAACGATCGCTACATCTGCCCGGCCGGCAAGGAACTGA
PROTEIN sequence
Length: 326
MMGCQAAPAQLFYDFSLDDHVPAGHLLRGIDRHLDLGRVRARLKPFYSGTGRPSVDPELMMRMLIIGYCMGIRSERRLCEEVHLNLAYRWFCRLGLDGKVPDHSSFSKNRHGRFRQSDILRLMFETVVERCLAERLVGAEGFAVDASLIAADANKQRSVPGAEWEPKDEASRSVREYLSVLDDAAFGAASPVTPKFISPSDPAAQWTGAYKGHAFFAYATNYLIDTEHGVILDVEATRAIRQAEVGASRTMIQRTEDRFGLKPEYVVADSAYALLTTLPGSSRKRGSRHTSPSSTSRSGPTVLSRARTSPGRRRTIATSARPARN*