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cn_combo_scaffold_6606_2

Organism: CN-SCN_Agrobacterium_19x

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 1325..1603

Top 3 Functional Annotations

Value Algorithm Source
transposase n=2 Tax=Sinorhizobium medicae RepID=UPI0003117766 similarity UNIREF
DB: UNIREF100
  • Identity: 86.5
  • Coverage: 89.0
  • Bit_score: 152
  • Evalue 2.40e-34
Transposase {ECO:0000313|EMBL:KGD87656.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobiu similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 92.0
  • Bit_score: 170
  • Evalue 1.20e-39
transposase similarity KEGG
DB: KEGG
  • Identity: 88.8
  • Coverage: 89.0
  • Bit_score: 154
  • Evalue 1.80e-35

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Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 279
ATGCCAACGCGCAAGGTGCCGCGTGATCTCAGCGAGGACGCCCGGGACGTCGCGAGAGCGATCGCTGCCACGCCCGAATACGATCTGTCACGCCATCGCCGGAAGAAGGTCGAGATGCTCTTTGCTCACCTGAAGCGCATTCTCCGGATGGCACGCCTCAGACTGCGAGGTCCATGCGGTGCCCGCGATGAATTCCTGCTCGCAGCGACCGCCCAAAACCTGAGGAGGCTTGCCAAGCTGAGGCCACTGCGACCGCCGCAAGGCGCTATCGCCGCCTGA
PROTEIN sequence
Length: 93
MPTRKVPRDLSEDARDVARAIAATPEYDLSRHRRKKVEMLFAHLKRILRMARLRLRGPCGARDEFLLAATAQNLRRLAKLRPLRPPQGAIAA*