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cn_combo_scaffold_343

Alias: BURK59_3

Search features with annotation key words

Displaying items 1-30 of 110 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_343_1
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

214..1179
DNA (966bp) protein (322aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
tRNA-dihydrouridine synthase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MJK2_ACIET
tRNA-dihydrouridine synthase a
cn_combo_scaffold_343_2
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1388..2746
DNA (1359bp) protein (453aa)
Polyhydroxyalkanoate depolymerase, intracellular n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W7L4_ACISJ
polyhydroxyalkanoate depolymerase
Polyhydroxyalkanoate depolymerase, intracellular {ECO:0000313|EMBL:ABM42239.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" sourc
cn_combo_scaffold_343_3
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2763..3383
DNA (621bp) protein (207aa)
ferredoxin n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036954CE
Predicted NADH:ubiquinone oxidoreductase, subunit RnfB {ECO:0000313|EMBL:GAD20395.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;
RnfABCDGE type electron transport complex subunit B
cn_combo_scaffold_343_4
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3385..4890)
DNA (1506bp) protein (502aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W7L6_ACISJ
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ABM42241.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source=
cn_combo_scaffold_343_5
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5019..6182
DNA (1164bp) protein (388aa)
Twitching motility protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1I2_9BURK
twitching motility protein
Twitching motility protein {ECO:0000313|EMBL:AFU46150.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS1
cn_combo_scaffold_343_6
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6255..8186
DNA (1932bp) protein (644aa)
ABC transporter related protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GD58_ALIDK
ABC transporter {ECO:0000313|EMBL:EXU81737.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1877.;"
ABC transporter
cn_combo_scaffold_343_7
unknown

Not on your lists

8346..8441
DNA (96bp) protein (32aa)

This feature has no annotations

cn_combo_scaffold_343_8
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8534..9271)
DNA (738bp) protein (246aa)
acetoacetyl-CoA reductase (EC:1.1.1.36)
Acetoacetyl-CoA reductase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TAD3_ACIDE
Acetoacetyl-CoA reductase {ECO:0000313|EMBL:EER58560.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafield
cn_combo_scaffold_343_9
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9379..10560)
DNA (1182bp) protein (394aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
acetyl-CoA acetyltransferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000371AD4A
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:GAD24119.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. M
cn_combo_scaffold_343_10
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10629..12356)
DNA (1728bp) protein (576aa)
poly(R)-hydroxyalkanoic acid synthase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036F59D2
Poly(3-hydroxyalkanoate) synthetase {ECO:0000313|EMBL:GAD24120.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovora
poly(r)-hydroxyalkanoic acid synthase, class i
cn_combo_scaffold_343_11
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12468..12803
DNA (336bp) protein (112aa)
UPI0003D3FC51 related cluster n=1 Tax=unknown RepID=UPI0003D3FC51
Uncharacterized protein {ECO:0000313|EMBL:GAD24121.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
hypothetical protein
cn_combo_scaffold_343_12
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12690..13559)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MIX1_ACIET
hypothetical protein
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (st
cn_combo_scaffold_343_13
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13678..14253
DNA (576bp) protein (192aa)
fumarylacetoacetate (FAA) hydrolase id=5081229 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
fumarylacetoacetate (FAA) hydrolase Tax=GWE1_Burkholderiales_65_30_curated
fumarylacetoacetate (faa) hydrolase
cn_combo_scaffold_343_14
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14272..14820
DNA (549bp) protein (183aa)
ADP-ribose pyrophosphatase n=1 Tax=Acidovorax sp. CF316 RepID=J0KET7_9BURK
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:EJE49773.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF3
nudix hydrolase
cn_combo_scaffold_343_15
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14907..15755
DNA (849bp) protein (283aa)
YdjC family protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5R9_ACIDE
YdjC family protein {ECO:0000313|EMBL:EER60180.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN
hypothetical protein
cn_combo_scaffold_343_16
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15770..17359
DNA (1590bp) protein (530aa)
Glycosyl transferase family 39 n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5S0_ACIDE
Glycosyl transferase, family 39 {ECO:0000313|EMBL:GAO22524.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicyclip
glycosyl transferase family protein
cn_combo_scaffold_343_17
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17276..17656)
DNA (381bp) protein (127aa)
GtrA family protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5S1_ACIDE
GtrA family protein {ECO:0000313|EMBL:EER60182.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovo
GtrA-like protein
cn_combo_scaffold_343_18
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17653..18609)
DNA (957bp) protein (319aa)
Glycosyl transferase family 2 n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5S2_ACIDE
Glycosyl transferase family 2 {ECO:0000313|EMBL:EER60183.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delaf
glycosyl transferase family protein
cn_combo_scaffold_343_19
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19166..20455
DNA (1290bp) protein (430aa)
Glycine betaine/L-proline ABC transporter, ATPase subunit n=2 Tax=Alicycliphilus denitrificans RepID=E8U2A3_ALIDB
glycine betaine/l-proline ABC transporter ATPase
Glycine betaine/L-proline ABC transporter, ATPase subunit {ECO:0000313|EMBL:ADU98907.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliph
cn_combo_scaffold_343_20
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20473..21570
DNA (1098bp) protein (366aa)
Binding-protein-dependent transport systems inner membrane component n=2 Tax=Alicycliphilus denitrificans RepID=E8U2A2_ALIDB
ABC transporter permease
Binding-protein-dependent transport system inner membrane protein {ECO:0000313|EMBL:GAO27007.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; A
cn_combo_scaffold_343_21
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21640..22653
DNA (1014bp) protein (338aa)
glycine/betaine ABC transporter n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00038095CB
Glycine betaine/proline transport system substrate-binding protein {ECO:0000313|EMBL:EZP63044.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
glycine/betaine ABC transporter substrate-binding protein
cn_combo_scaffold_343_22
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22696..23688
DNA (993bp) protein (331aa)
porin n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000363D7D6
Porin {ECO:0000313|EMBL:GAD23203.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
porin
cn_combo_scaffold_343_23
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23688..24200
DNA (513bp) protein (171aa)
SH3 type 3 domain protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TWL5_ALIDB
sh3 type 3 domain-containing protein
SH3 type 3 domain protein {ECO:0000313|EMBL:ADU99538.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" sourc
cn_combo_scaffold_343_24
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(24287..26083)
DNA (1797bp) protein (599aa)
Aspartate--tRNA ligase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8U0X4_ALIDB
aspartyl-tRNA synthetase
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:GAO26811.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus s
cn_combo_scaffold_343_25
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26124..26753)
DNA (630bp) protein (210aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U0X3_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU98724.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
cn_combo_scaffold_343_26
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27153..28601)
DNA (1449bp) protein (483aa)
Na+/solute symporter n=1 Tax=Acidovorax sp. NO-1 RepID=H0BYF7_9BURK
Na+/solute symporter Tax=GWA2_Burkholderiales_64_37_curated
Na+/solute symporter
cn_combo_scaffold_343_27
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28697..30262)
DNA (1566bp) protein (522aa)
ubiB; putative ubiquinone biosynthesis protein UbiB (EC:1.14.13.-)
Probable protein kinase UbiB {ECO:0000255|HAMAP-Rule:MF_00414}; EC=2.7.-.- {ECO:0000255|HAMAP-Rule:MF_00414};; Ubiquinone biosynthesis protein UbiB {ECO:0000255|HAMAP-Rule:MF_00414}; TaxID=232721 spec
Probable protein kinase UbiB n=1 Tax=Acidovorax sp. (strain JS42) RepID=UBIB_ACISJ
cn_combo_scaffold_343_28
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30259..30801)
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035DFDF1
Uncharacterized protein {ECO:0000313|EMBL:GAD23266.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
hypothetical protein
cn_combo_scaffold_343_29
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30829..31833)
DNA (1005bp) protein (335aa)
Import inner membrane translocase, subunit Tim44 n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W4D5_ACISJ
import inner membrane translocase subunit Tim44
Import inner membrane translocase, subunit Tim44 {ECO:0000313|EMBL:ABM41110.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae;
cn_combo_scaffold_343_30
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31870..32571)
DNA (702bp) protein (234aa)
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; EC=2.1.1.201 {ECO:0000256|HAMAP-Rule:MF_01813};; 2-meth
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W4D4_ACISJ
ubiquinone/menaquinone biosynthesis methyltransferase
Displaying items 1-30 of 110 in total

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