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cn_combo_scaffold_704

Alias: BURK59_12

Search features with annotation key words

Displaying items 1-30 of 229 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_704_1
CG_Rhodof_01, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..290
DNA (288bp) protein (96aa)
pstB2; phosphate import ATP-binding protein (EC:3.6.3.27); K02036 phosphate transport system ATP-binding protein [EC:3.6.3.27] Tax=CG_Rhodof_01
High-affinity phosphate transport protein (ABC superfamily, atp_bind) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MEI3_9BACT
pstB; high-affinity phosphate transport protein (ABC superfamily, atp_bind)
cn_combo_scaffold_704_2
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

319..1062
DNA (744bp) protein (248aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G2G4_HERAR
transcriptional repressor for high-affinity phosphate uptake; K02039 phosphate transport system protein Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
transcriptional repressor for high-affinity phosphate uptake
cn_combo_scaffold_704_3
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1212..2171
DNA (960bp) protein (320aa)
Phosphonate ABC transporter periplasmic phosphonate-binding protein n=2 Tax=Alcaligenes faecalis RepID=J0JE05_ALCFA
Oxyanion binding protein {ECO:0000313|EMBL:AAQ19836.1}; TaxID=511 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes faecalis.;"
phosphonate-binding periplasmic protein
cn_combo_scaffold_704_4
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2198..3025
DNA (828bp) protein (276aa)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=1156918 species="Bacteria; Proteobacteria; Betaproteobacteria; Bur
Phosphonates import ATP-binding protein PhnC n=2 Tax=Alcaligenes faecalis RepID=PHNC_ALCFA
phosphonate ABC transporter ATPase
cn_combo_scaffold_704_5
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3022..3825
DNA (804bp) protein (268aa)
Phosphonate ABC transporter, ATPase subunit n=2 Tax=Alcaligenes faecalis RepID=J0AZ85_ALCFA
Phosphonate ABC transporter, ATPase subunit {ECO:0000313|EMBL:EJC61957.1}; TaxID=1156918 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="
phosphonate ABC transporter ATPase
cn_combo_scaffold_704_6
Oligella urethralis, Oligella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3822..4625
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Oligella urethralis RepID=UPI0003722B3E
Phosphonate ABC transporter permease {ECO:0000313|EMBL:KGF30462.1}; TaxID=1401065 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Oligella.;" source="Oligella u
phosphonate ABC transporter inner membrane subunit
cn_combo_scaffold_704_7
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5014..5817
DNA (804bp) protein (268aa)
LysR substrate binding domain protein n=2 Tax=Proteobacteria RepID=J4QJ89_9BURK
D-alanyl-D-alanine endopeptidase
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACS61918.1}; TaxID=428406 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralsto
cn_combo_scaffold_704_8
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5901..6854)
DNA (954bp) protein (318aa)
DNA binding domain, excisionase family n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IMD3_XANP2
DNA binding domain-containing protein
DNA binding domain, excisionase family {ECO:0000313|EMBL:ABS69176.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xantho
cn_combo_scaffold_704_9
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7042..7836
DNA (795bp) protein (265aa)
modA-1; molybdenum ABC transporter periplasmic molybdate-binding protein; K02020 molybdate transport system substrate-binding protein id=5079808 bin=GWF1_Burkholderiales_GWF1_66_17 species=Methylococcus capsulatus genus=Methylococcus taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
modA-1; molybdenum ABC transporter periplasmic molybdate-binding protein; K02020 molybdate transport system substrate-binding protein Tax=GWE1_Burkholderiales_65_30_curated
modA-1; molybdenum ABC transporter periplasmic molybdate-binding protein
cn_combo_scaffold_704_10
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7859..8629
DNA (771bp) protein (257aa)
molybdate ABC transporter substrate-binding protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00035D3575
modA-2; molybdenum ABC transporter periplasmic molybdate-binding protein; K02020 molybdate transport system substrate-binding protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
modA-2; molybdenum ABC transporter periplasmic molybdate-binding protein
cn_combo_scaffold_704_11
Azotobacter chroococcum, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8645..9463
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00036A9BCB
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE23256.1}; TaxID=1328314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter chroo
cn_combo_scaffold_704_12
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9479..10156
DNA (678bp) protein (226aa)
molybdenum ABC transporter permease n=1 Tax=Methyloversatilis sp. NVD RepID=UPI0003718592
modB; molybdenum ABC transporter permease
Tax=BJP_08E140C01_Burkholderiales_65_30
cn_combo_scaffold_704_13
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10161..11225
DNA (1065bp) protein (355aa)
Molybdenum import ATP-binding protein ModC {ECO:0000255|HAMAP-Rule:MF_01705}; EC=3.6.3.29 {ECO:0000255|HAMAP-Rule:MF_01705};; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methy
molybdenum ABC transporter ATP-binding protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI00038139F9
modC; molybdenum ABC transporter ATP-binding protein
cn_combo_scaffold_704_14
unknown

Not on your lists

11312..11476
DNA (165bp) protein (55aa)

This feature has no annotations

cn_combo_scaffold_704_15
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11989..12324
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SME8_METPP
prevent-host-death family protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
hypothetical protein
cn_combo_scaffold_704_16
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12321..12746
DNA (426bp) protein (142aa)
Ribonuclease VapC n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6WQ77_9MICO
PilT domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PilT domain-containing protein
cn_combo_scaffold_704_17
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12785..15484
DNA (2700bp) protein (900aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256
Alanine--tRNA ligase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G4X4_ALIDK
alanyl-tRNA synthetase
cn_combo_scaffold_704_18
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15484..16014
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI000309327C
redoxin domain-containing protein Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
redoxin domain-containing protein
cn_combo_scaffold_704_19
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16140..17252
DNA (1113bp) protein (371aa)
Transglutaminase domain protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VRF9_POLNA
transglutaminase domain-containing protein
Transglutaminase domain protein {ECO:0000313|EMBL:ABM38237.1}; Flags: Precursor;; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" so
cn_combo_scaffold_704_20
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17264..17602
DNA (339bp) protein (113aa)
tRNA-binding protein n=1 Tax=Methylophilus methylotrophus RepID=UPI000372C9B2
tRNA-binding protein {ECO:0000313|EMBL:KGM56706.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arsenicires
tRNA-binding protein
cn_combo_scaffold_704_21
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17789..18103
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y5X5_RAMTT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG91479.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouine
cn_combo_scaffold_704_22

Not on your lists

comp(18107..19132)
DNA (1026bp) protein (342aa)
ABC transporter (EC:3.6.3.30)
ABC transporter n=1 Tax=Methylopila sp. M107 RepID=UPI00035E404B
Uncharacterized protein {ECO:0000313|EMBL:KKN13534.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
cn_combo_scaffold_704_23

Not on your lists

comp(19129..20703)
DNA (1575bp) protein (525aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI000363211E
Uncharacterized protein {ECO:0000313|EMBL:KKN13533.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
fbpB; iron(III)-transporter permease
cn_combo_scaffold_704_24
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20721..21665)
DNA (945bp) protein (315aa)
Outer membrane porin protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SC03_METPP
Outer membrane porin protein 32 {ECO:0000313|EMBL:EWS60177.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
outer membrane porin protein
cn_combo_scaffold_704_25
Pseudomonas sp. FH4, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21885..22913)
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037D11DE
Putative iron-binding periplasmic protein {ECO:0000313|EMBL:ETK16164.1}; TaxID=1284393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source=
iron ABC transporter substrate-binding protein
cn_combo_scaffold_704_26
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22995..23459)
DNA (465bp) protein (155aa)
Transcriptional regulator, AsnC family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UWA2_VARPE
AsnC family transcriptional regulator; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
AsnC family transcriptional regulator
cn_combo_scaffold_704_27
Thauera aminoaromatica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23602..24915
DNA (1314bp) protein (438aa)
D-amino acid dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01202}; EC=1.4.99.1 {ECO:0000256|HAMAP-Rule:MF_01202};; TaxID=1234381 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodoc
D-amino acid dehydrogenase small subunit n=1 Tax=Thauera aminoaromatica S2 RepID=N6YLI1_9RHOO
D-amino acid dehydrogenase small subunit
cn_combo_scaffold_704_28
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24929..26365)
DNA (1437bp) protein (479aa)
aldehyde dehydrogenase; K00154 coniferyl-aldehyde dehydrogenase [EC:1.2.1.68] Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
Aldehyde dehydrogenase n=1 Tax=Polaromonas sp. CF318 RepID=J2KZF0_9BURK
aldehyde dehydrogenase
cn_combo_scaffold_704_29
Marinobacter adhaerens, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26362..27867)
DNA (1506bp) protein (502aa)
Acyltransferase, WS/DGAT/MGAT n=1 Tax=Marinobacter adhaerens (strain HP15) RepID=E4PN77_MARAH
acyltransferase, WS/DGAT/MGAT
Acyltransferase, WS/DGAT/MGAT {ECO:0000313|EMBL:ADP98710.1}; TaxID=225937 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacte
cn_combo_scaffold_704_30
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27906..30155)
DNA (2250bp) protein (750aa)
Putative dehydrogenase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21X14_RHOFD
putative dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
putative dehydrogenase
Displaying items 1-30 of 229 in total

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