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cn_combo_scaffold_1191

Alias: BURK59_18

Search features with annotation key words

Displaying items 1-30 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_1191_trna_3
unknown

Not on your lists

comp(184..256)
DNA (73bp)
transferRNA
cn_combo_scaffold_1191_1
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(303..2225)
DNA (1923bp) protein (641aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholder
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MG68_ACIET
ppic-type peptidyl-prolyl cis-trans isomerase
cn_combo_scaffold_1191_trna_2
unknown

Not on your lists

comp(2292..2364)
DNA (73bp)
transferRNA
cn_combo_scaffold_1191_2
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2380..2652)
DNA (273bp) protein (91aa)
Histone family protein DNA-binding protein n=2 Tax=Acidovorax RepID=A1W953_ACISJ
Histone family protein DNA-binding protein {ECO:0000313|EMBL:GAO24016.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source
histone family protein DNA-binding protein
cn_combo_scaffold_1191_3
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2880..3446)
DNA (567bp) protein (189aa)
cdp-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:AEB84014.1}; EC=2.7.8.5 {ECO:0000313|EMBL:AEB84014.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteoba
CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase n=2 Tax=Alicycliphilus denitrificans RepID=E8TVV8_ALIDB
cn_combo_scaffold_1191_4
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3496..4419)
DNA (924bp) protein (308aa)
SPFH domain, Band 7 family protein n=2 Tax=Acidovorax RepID=A1W9I0_ACISJ
hypothetical protein
Band 7 protein {ECO:0000313|EMBL:ACM33692.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY)
cn_combo_scaffold_1191_5
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4452..4889)
DNA (438bp) protein (146aa)
Uncharacterized protein n=2 Tax=Acidovorax RepID=A1W9H9_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM42904.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci
cn_combo_scaffold_1191_6
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5032..7308
DNA (2277bp) protein (759aa)
ornithine decarboxylase (EC:4.1.1.17)
lysine decarboxylase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003705A7E
Ornithine decarboxylase {ECO:0000313|EMBL:GAD21439.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.
cn_combo_scaffold_1191_7
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7533..9452
DNA (1920bp) protein (640aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
Threonine--tRNA ligase n=2 Tax=Alicycliphilus denitrificans RepID=E8TRN3_ALIDB
threonyl-tRNA synthetase
cn_combo_scaffold_1191_8
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9606..10139
DNA (534bp) protein (178aa)
Translation initiation factor IF-3 n=2 Tax=Alicycliphilus denitrificans RepID=F4G433_ALIDK
translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadacea
cn_combo_scaffold_1191_9
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10320..10517
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=2 Tax=Acidovorax RepID=RL35_ACIET
rpmI; 50S ribosomal protein l35
50S ribosomal protein L35 {ECO:0000255|HAMAP-Rule:MF_00514}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (
cn_combo_scaffold_1191_10
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10536..10895
DNA (360bp) protein (120aa)
50S ribosomal protein L20 n=6 Tax=Comamonadaceae RepID=RL20_ACISJ
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovor
50S ribosomal protein L20
cn_combo_scaffold_1191_11
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10998..12071
DNA (1074bp) protein (358aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
Phenylalanine--tRNA ligase alpha subunit n=2 Tax=Alicycliphilus denitrificans RepID=E8TR07_ALIDB
phenylalanyl-tRNA synthetase subunit alpha
cn_combo_scaffold_1191_12
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12185..14614
DNA (2430bp) protein (810aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TR06_ALIDB
phenylalanyl-tRNA synthetase subunit beta
cn_combo_scaffold_1191_13
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14611..14949
DNA (339bp) protein (113aa)
Integration host factor subunit alpha n=2 Tax=Alicycliphilus denitrificans RepID=E8TR05_ALIDB
ihfA; integration host factor alpha-subunit; K04764 integration host factor subunit alpha Tax=GWA2_Curvibacter_64_110_curated
integration host factor subunit alpha
cn_combo_scaffold_1191_14
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15035..15415
DNA (381bp) protein (127aa)
Transcriptional regulator, MerR family n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W8H9_ACISJ
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ACM32917.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovo
cn_combo_scaffold_1191_trna_1
unknown

Not on your lists

15440..15513
DNA (74bp)
transferRNA
cn_combo_scaffold_1191_15
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15739..16278
DNA (540bp) protein (180aa)
Polyhydroxyalkanoate synthesis repressor PhaR n=2 Tax=Alicycliphilus denitrificans RepID=E8TRI0_ALIDB
polyhydroxyalkonate synthesis repressor PhaR
Polyhydroxyalkanoate synthesis repressor PhaR {ECO:0000313|EMBL:ADU99081.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" sour
cn_combo_scaffold_1191_16
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16383..18527
DNA (2145bp) protein (715aa)
Generic methyltransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WJF8_9GAMM
Generic methyltransferase {ECO:0000313|EMBL:EIL99599.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter
hypothetical protein
cn_combo_scaffold_1191_17
unknown

Not on your lists

18638..18781
DNA (144bp) protein (48aa)

This feature has no annotations

cn_combo_scaffold_1191_18

Not on your lists

18781..19818
DNA (1038bp) protein (346aa)
ADP-ribosylation/Crystallin J1 {ECO:0000313|EMBL:EQD57243.1}; EC=3.2.2.19 {ECO:0000313|EMBL:EQD57243.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="m
ADP-ribosylation/Crystallin J1 n=1 Tax=mine drainage metagenome RepID=T1AL83_9ZZZZ
hypothetical protein
cn_combo_scaffold_1191_19
Nitrosomonas eutropha, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19836..20534
DNA (699bp) protein (233aa)
Oxidoreductase FAD/NAD(P)-binding domain protein n=1 Tax=Nitrosomonas eutropha (strain C91) RepID=Q0AI51_NITEC
oxidoreductase FAD/NAD(P)-binding subunit
Oxidoreductase FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:ABI58981.1}; TaxID=335283 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;"
cn_combo_scaffold_1191_20
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20528..21067)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12GP8_POLSJ
hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
cn_combo_scaffold_1191_21
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21083..21961)
DNA (879bp) protein (293aa)
Candidate membrane protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y5D5_RAMTT
membrane protein
Candidate membrane protein {ECO:0000313|EMBL:AEG91445.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataou
cn_combo_scaffold_1191_22
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21982..22587)
DNA (606bp) protein (202aa)
LemA family protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MJN6_9BURK
LemA family protein {ECO:0000313|EMBL:EIK89426.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC
lema family protein
cn_combo_scaffold_1191_23
Pseudomonas sp. EGD-AK9, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22613..23122)
DNA (510bp) protein (170aa)
Ecotin n=1 Tax=Pseudomonas sp. EGD-AK9 RepID=U2B032_9PSED
Ecotin {ECO:0000313|EMBL:ERI50362.1}; TaxID=1386078 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. EGD-AK9.;"
eco; Ecotin
cn_combo_scaffold_1191_24
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23149..23640)
DNA (492bp) protein (164aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Curvibacter lanceolatus RepID=UPI00036D7BDF
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {E
cn_combo_scaffold_1191_25
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23637..24311)
DNA (675bp) protein (225aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; K12506 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase id=1266330 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
cn_combo_scaffold_1191_26
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24325..26652)
DNA (2328bp) protein (776aa)
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CYP7_VARPS
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding {ECO:0000313|EMBL:ACS19006.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Va
cn_combo_scaffold_1191_27
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26917..30492
DNA (3576bp) protein (1192aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=543728 species="Bacteria; Pr
Transcription-repair-coupling factor n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CKQ0_VARPS
transcription-repair coupling factor
Displaying items 1-30 of 100 in total

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