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cn_combo_scaffold_6864

Alias: BURK59_41

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_6864_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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3..206
DNA (204bp) protein (68aa)
hypothetical protein; K09008 hypothetical protein id=12496997 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein; K09008 hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
cn_combo_scaffold_6864_2
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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956..3082
DNA (2127bp) protein (709aa)
TonB-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein id=12496996 bin=THIO_MID species=Thauera linaloolentis genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
TonB-dependent siderophore receptor {ECO:0000313|EMBL:ENO86967.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linalo
TonB-dependent siderophore receptor
cn_combo_scaffold_6864_3
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3120..4136
DNA (1017bp) protein (339aa)
periplasmic-binding protein; K02016 iron complex transport system substrate-binding protein id=12496995 bin=THIO_MID species=Thauera linaloolentis genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Periplasmic-binding protein {ECO:0000313|EMBL:ENO86966.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis
periplasmic-binding protein
cn_combo_scaffold_6864_4
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4143..5246
DNA (1104bp) protein (368aa)
iron ABC transporter permease; K02015 iron complex transport system permease protein id=12496994 bin=THIO_MID species=Thauera linaloolentis genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Transport system permease {ECO:0000313|EMBL:ENO86965.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47
ABC transporter permease
cn_combo_scaffold_6864_5
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5243..6016
DNA (774bp) protein (258aa)
iron(III) dicitrate transport ATP-binding protein fecE; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] id=12496993 bin=THIO_MID species=Thauera linaloolentis genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Iron(III) dicitrate transport ATP-binding protein fecE {ECO:0000313|EMBL:ENO86964.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" sou
ABC transporter ATP-binding protein
cn_combo_scaffold_6864_6
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6003..6758
DNA (756bp) protein (252aa)
cobalamin (vitamin B12) biosynthesis CbiX protein id=12496992 bin=THIO_MID species=Thauera linaloolentis genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Cobalamin (Vitamin B12) biosynthesis CbiX protein {ECO:0000313|EMBL:ENO86963.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="
cobalamin (vitamin B12) biosynthesis CbiX protein
cn_combo_scaffold_6864_7
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6769..7422)
DNA (654bp) protein (218aa)
HAD family hydrolase; K07025 putative hydrolase of the HAD superfamily id=12496991 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
HAD family hydrolase
HAD-superfamily hydrolase subfamily IA, variant 3 {ECO:0000313|EMBL:AAZ96792.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus
cn_combo_scaffold_6864_8
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7419..8336)
DNA (918bp) protein (306aa)
histone deacetylase family protein id=12496990 bin=THIO_MID species=unknown genus=unknown taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
histone deacetylase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
histone deacetylase rbh
cn_combo_scaffold_6864_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8341..8877)
DNA (537bp) protein (179aa)
RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor id=12496989 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
RNA polymerase sigma factor RpoS; K03087 RNA polymerase nonessential primary-like sigma factor Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RNA polymerase sigma factor RpoS
Displaying 9 items

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