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cn_combo_scaffold_338_29

Organism: CN-SCN_Comamonas_56x

near complete RP 48 / 55 MC: 1 BSCG 48 / 51 ASCG 14 / 38 MC: 1
Location: comp(28663..28896)

Top 3 Functional Annotations

Value Algorithm Source
Type III secretion protein n=1 Tax=Pandoraea pnomenusa 3kgm RepID=V5PWA7_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 52.6
  • Coverage: 76.0
  • Bit_score: 82
  • Evalue 1.50e-13
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 76.0
  • Bit_score: 82
  • Evalue 4.20e-14
Type III secretion protein {ECO:0000313|EMBL:AHB07186.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenu similarity UNIPROT
DB: UniProtKB
  • Identity: 52.6
  • Coverage: 76.0
  • Bit_score: 82
  • Evalue 2.10e-13

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Taxonomy

Pandoraea pnomenusa → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 234
ATGGCCAACGGCATCAGTTTCGATCTCATCGCCAACACTTTGGGTGCCGTGGGCACCGCCCGCGAATCCGAGCTGCGCGGCATGATCACCGGCCTGGGCCCGGACGCGACCACACTGGACCTGCTCAAGCTGCAGCAACAAATGCAGCAATGGACCATGTTCACGCAGATCCAGAGCACCGTGGTCAAGGAAGTCGGCGACGCCATGAAAGGCGTGATCCAGAAAGCCGCCTGA
PROTEIN sequence
Length: 78
MANGISFDLIANTLGAVGTARESELRGMITGLGPDATTLDLLKLQQQMQQWTMFTQIQSTVVKEVGDAMKGVIQKAA*