ggKbase home page

cn_combo_scaffold_338

Alias: BURK59_2

Search features with annotation key words

Displaying items 1-30 of 114 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
cn_combo_scaffold_338_1
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1039
DNA (1038bp) protein (346aa)
coniferyl-aldehyde dehydrogenase (EC:1.2.1.68)
Aldehyde dehydrogenase n=2 Tax=Alicycliphilus denitrificans RepID=E8TZF9_ALIDB
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus de
cn_combo_scaffold_338_2
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1014..1226
DNA (213bp) protein (71aa)
Aldehyde dehydrogenase n=2 Tax=Alicycliphilus denitrificans RepID=E8TZF9_ALIDB
aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus de
cn_combo_scaffold_338_3
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1320..1841
DNA (522bp) protein (174aa)
GCN5-like N-acetyltransferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I7C9_9BURK
GCN5-like N-acetyltransferase {ECO:0000313|EMBL:GAD24274.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp.
N-acetyltransferase GCN5
cn_combo_scaffold_338_4
Marichromatium purpuratum, Marichromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1892..2224)
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Methylomonas sp. MK1 RepID=UPI00037D1541
HicB
HicB {ECO:0000313|EMBL:AHF04069.1}; TaxID=765910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Marichromatium.;" source="Marichromatium purpuratum 984.;"
cn_combo_scaffold_338_5
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2416..3129
DNA (714bp) protein (238aa)
Protein containing DUF1814 n=1 Tax=mine drainage metagenome RepID=T1BHD7_9ZZZZ
hypothetical protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
cn_combo_scaffold_338_6
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3487..4599)
DNA (1113bp) protein (371aa)
riboflavin biosynthesis protein ribd (EC:3.5.4.26 1.1.1.193)
Riboflavin biosynthesis protein RibD n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MDG8_ACIET
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovo
cn_combo_scaffold_338_7
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4641..5270)
DNA (630bp) protein (210aa)
Tfp pilus assembly protein n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002375057
general secretion pathway, GspH; K08084 type IV fimbrial biogenesis protein FimT Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
general secretion pathway, GspH
cn_combo_scaffold_338_8
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5680..10110)
DNA (4431bp) protein (1477aa)
Tfp pilus assembly protein tip-associated adhesin PilY1-like protein n=2 Tax=Comamonas testosteroni RepID=B7WRV8_COMTE
Tfp pilus assembly protein tip-associated adhesin PilY1-like protein {ECO:0000313|EMBL:EED69012.1}; Flags: Precursor;; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderial
Tfp pilus assembly protein tip-associated adhesin PilY1-like protein
cn_combo_scaffold_338_9
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10128..10760)
DNA (633bp) protein (211aa)
Putative transmembrane protein n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WLQ5_VEREI
hypothetical protein; K02673 type IV pilus assembly protein PilX Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
hypothetical protein
cn_combo_scaffold_338_10
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10776..11834)
DNA (1059bp) protein (353aa)
Putative transmembrane protein n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WRV7_COMTE
Putative transmembrane protein {ECO:0000313|EMBL:EED69011.1}; Flags: Precursor;; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" sourc
hypothetical protein
cn_combo_scaffold_338_11
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11831..12448)
DNA (618bp) protein (206aa)
Type IV pilus modification protein PilV n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WRV6_COMTE
Type IV pilus modification protein PilV {ECO:0000313|EMBL:EED69010.1}; Flags: Precursor;; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas
type IV pilus modification protein PilV
cn_combo_scaffold_338_12
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12556..12789
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P5M5_AROAE
hypothetical protein
Ribbon-helix-helix protein, copG family {ECO:0000313|EMBL:EZP55243.1}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia
cn_combo_scaffold_338_13
CG_Rhodof_01, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12826..13167
DNA (342bp) protein (114aa)
HicB n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NK01_9DELT
putative toxin-antitoxin system antitoxin component Tax=CG_Rhodof_01
hypothetical protein
cn_combo_scaffold_338_14
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13128..13328
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XB45_DELAC
Uncharacterized protein {ECO:0000313|EMBL:KEH11375.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein
cn_combo_scaffold_338_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13473..13760)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DK71_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
hypothetical protein
cn_combo_scaffold_338_16

Not on your lists

comp(13729..13998)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DI04_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD97647.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
cn_combo_scaffold_338_17
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14366..16381)
DNA (2016bp) protein (672aa)
Histidine kinase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HSV7_AZOC5
histidine kinase
Histidine kinase {ECO:0000313|EMBL:BAF90221.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (s
cn_combo_scaffold_338_18
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16383..17180)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IIC0_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS67763.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xa
cn_combo_scaffold_338_19
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17170..17925)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IIC1_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM23275.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella de
cn_combo_scaffold_338_20
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17922..19082)
DNA (1161bp) protein (387aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201};; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae;
Alanine racemase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HST8_AZOC5
alanine racemase
cn_combo_scaffold_338_21
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19084..19749)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HSU3_AZOC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF90215.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulino
cn_combo_scaffold_338_22
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19746..20789)
DNA (1044bp) protein (348aa)
Putative ABC-type uncharacterized transport system periplasmic component n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HSU6_AZOC5
ABC transporter periplasmic protein
Putative ABC-type uncharacterized transport system periplasmic component {ECO:0000313|EMBL:BAF90216.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacterac
cn_combo_scaffold_338_23
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20858..23233)
DNA (2376bp) protein (792aa)
Major facilitator superfamily MFS_1 n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IIC3_XANP2
Permease of the major facilitator superfamily
Permease of the major facilitator superfamily {ECO:0000313|EMBL:CDM23271.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" sou
cn_combo_scaffold_338_24
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23230..23685)
DNA (456bp) protein (152aa)
Putative anti-sigma factor n=1 Tax=Achromobacter xylosoxidans NH44784-1996 RepID=R4XLC1_ALCXX
putative anti-sigma factor
Putative anti-sigma factor {ECO:0000313|EMBL:CCH05414.1}; TaxID=1167634 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter x
cn_combo_scaffold_338_25
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23776..24108
DNA (333bp) protein (111aa)
Anti-sigma factor antagonist n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T1N5_ALCXX
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobact
anti-sigma factor antagonist
cn_combo_scaffold_338_26
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24128..24601)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017458B7
Uncharacterized protein
Uncharacterized protein {ECO:0000313|EMBL:CDI03396.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competib
cn_combo_scaffold_338_27
Verrucomicrobium spinosum, Verrucomicrobium, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(24653..27124)
DNA (2472bp) protein (824aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017458B8
cn_combo_scaffold_338_28
Chromobacterium violaceum, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27202..28563)
DNA (1362bp) protein (454aa)
Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=Q7NVQ0_CHRVO
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AAQ59964.1}; TaxID=243365 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromob
cn_combo_scaffold_338_29
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28663..28896)
DNA (234bp) protein (78aa)
Type III secretion protein n=1 Tax=Pandoraea pnomenusa 3kgm RepID=V5PWA7_9BURK
hypothetical protein
Type III secretion protein {ECO:0000313|EMBL:AHB07186.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenu
cn_combo_scaffold_338_30
unknown

Not on your lists

comp(28944..29228)
DNA (285bp) protein (95aa)

This feature has no annotations

Displaying items 1-30 of 114 in total

View Taxonomy