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cn_combo_scaffold_977_5

Organism: CN-SCN_Comamonas_56x

near complete RP 48 / 55 MC: 1 BSCG 48 / 51 ASCG 14 / 38 MC: 1
Location: comp(4588..5169)

Top 3 Functional Annotations

Value Algorithm Source
Polysaccharide export protein n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0E2D0_PSEDT similarity UNIREF
DB: UNIREF100
  • Identity: 51.6
  • Coverage: 182.0
  • Bit_score: 181
  • Evalue 7.80e-43
Polysaccharide export protein {ECO:0000313|EMBL:EGB99430.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas similarity UNIPROT
DB: UniProtKB
  • Identity: 51.6
  • Coverage: 182.0
  • Bit_score: 181
  • Evalue 1.10e-42
putative polysaccharide export protein similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 182.0
  • Bit_score: 178
  • Evalue 1.40e-42

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Taxonomy

Pseudomonas sp. TJI-51 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 582
ATGCGCATTCCTGCCATTTCCAAAGTCCTGCCGCTTCTCCTGCTCGCTCTGGCGCTCGCAGCGCCTTGGGGCAGCACGGCTTGGGCGCAATCGAAAGCGCCCTATACCCTGCATCCGGCAGACCGGCTGCAAGTCTCGGTCTGGCGCGATACCGCCTTGCAGCGCGAGGTGCGCGTACTGCCCGATGGCAGCATCACGCTGCCGCTGGTCGGGCGCATCGTGGTGGCCGGGCTCGATACCGATACCGTCGAGAAACAACTGGTGGAGCGACTCAAGCCCTACATGCCTGACCCCATCGTCACCGTGGCGGTGGCGGCAGCCGAGGGCAATGTGGTGTATGTCGTGGGCAAGGTCACCAAGCCCGGCGTCGTGCCGCTGATTACCGATGCCACCACGGTGCTGCAGGCGCTCAGCCTGGTGGGCGGGCTGGACCGCTTCGCCGATGGCAATGCAGTGCGCGTGCTGCGTGATGCCGGCGGCAAGCGCACGGTGATGGATGTGCGCTACAACGACCTGCTCAAAGGTGGCAGCCTGGATACCAACGTGGTGCTGCAGGCCGGCGACACCATCCTCGTGCCGTGA
PROTEIN sequence
Length: 194
MRIPAISKVLPLLLLALALAAPWGSTAWAQSKAPYTLHPADRLQVSVWRDTALQREVRVLPDGSITLPLVGRIVVAGLDTDTVEKQLVERLKPYMPDPIVTVAVAAAEGNVVYVVGKVTKPGVVPLITDATTVLQALSLVGGLDRFADGNAVRVLRDAGGKRTVMDVRYNDLLKGGSLDTNVVLQAGDTILVP*