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cn_combo_scaffold_1577_7

Organism: CN-SCN_Cytophagaceae_12x

partial RP 39 / 55 BSCG 38 / 51 ASCG 12 / 38
Location: comp(11330..11884)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003658CD9 similarity UNIREF
DB: UNIREF100
  • Identity: 72.5
  • Coverage: 182.0
  • Bit_score: 279
  • Evalue 2.60e-72
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 56.6
  • Coverage: 182.0
  • Bit_score: 215
  • Evalue 1.70e-53
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEI51226.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithy similarity UNIPROT
DB: UniProtKB
  • Identity: 56.6
  • Coverage: 182.0
  • Bit_score: 215
  • Evalue 8.50e-53

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Taxonomy

Runella slithyformis → Runella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 555
ATGTACGAACGTTTCTCGGATGAGGAATTGCTTTCTTGCCTGATTGAAGGGAACCAAAAAGCCTTCGAGGCAATTTACTGCCGGTACTGGTACCGGTTGTTCGGGGTTGCCTTTCATGAGATAGGGACAAAGGAAGAGGCTGAAGAGATACTGCATGACGTGTTTGAGAGCCTTTGGAGCAGGAGGGAGGAGGCATCTATCAGGAACCTGAGCGCTTACCTCGTCGTGGCTGTCAAGCACCGGATAACCAATTACATCAAATCCTGCATTACGCAACGCAAGTACCAGGAATACCTTATACTCAACGAAATCCAGCAGTCTTACGCGACCGACGAGATCGTCCATTTTTCGGATCTCTCCAAGGCGGTCGATGAGGTCATGAAAAAGCTTCCGGAGCGTACTTCCGAAGTGTTCAGGATGAGCCGCTTCGAAAACCTGCCCGTCAAGGAGATAGCCAGCAAGCTGAATATTTCGGAAAAAGGGGTAGAATATCATATCACACAGTCGCTGAAGCTGTTGCGGGAGCAGCTCAGGGTTTACCAATCTTATAACTAG
PROTEIN sequence
Length: 185
MYERFSDEELLSCLIEGNQKAFEAIYCRYWYRLFGVAFHEIGTKEEAEEILHDVFESLWSRREEASIRNLSAYLVVAVKHRITNYIKSCITQRKYQEYLILNEIQQSYATDEIVHFSDLSKAVDEVMKKLPERTSEVFRMSRFENLPVKEIASKLNISEKGVEYHITQSLKLLREQLRVYQSYN*