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cn_combo_scaffold_1596_28

Organism: CN-SCN_Cytophagaceae_12x

partial RP 39 / 55 BSCG 38 / 51 ASCG 12 / 38
Location: comp(28953..32261)

Top 3 Functional Annotations

Value Algorithm Source
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G6R6_ECHVK similarity UNIREF
DB: UNIREF100
  • Identity: 56.6
  • Coverage: 998.0
  • Bit_score: 1160
  • Evalue 0.0
SusC/RagA family TonB-linked outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 56.6
  • Coverage: 998.0
  • Bit_score: 1160
  • Evalue 0.0
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:AGA80696.1}; Flags: Precursor;; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echin similarity UNIPROT
DB: UniProtKB
  • Identity: 56.6
  • Coverage: 998.0
  • Bit_score: 1160
  • Evalue 0.0

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Taxonomy

Echinicola vietnamensis → Echinicola → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3309
ATGAAAATTTCGGCTTTGCCCTTGTTTTTACTCGGCTGGCTGGCTTCTGTATCAGCTGCTCATCCGCTGCTCAGCCAGGACCTGCTGGCCCGGCGGATCAGTATTAAGGCTGAAAAAACACCGCTTAAGGAAGTGCTCAGGCAGCTGAACAGGCAGGCGGATATACGGTTTTCCTATAACAGCAAGCAGATCGACGTGGATGTCCCGGTGAGCCTGGTATCGGCCAACGAGCCGCTCGGACAGGTACTGGATCGGCTGCTGACCCCGCTGGGGATCGGCTACACGGTCTATTCGCGGCTGGTGGTTCTCAAATCGCCCGATCCGGCGAAAAAAATGACCGGGGCTGATGCTGACAGCGTGGTTCCGCTTCCGGTGGTACAGACCGTGACCGGTCACGTAGCAGATGAGAAAGGGGAGTCTTTGCCAGGGGTAAATATCCTGCTGAAAGGTACGCAGCGGGGGATCATTACAGACGCAGGCGGGAATTTTTCGATCGAGGTGCCCGACGCTGATGCCGTCCTGGTGTTTTCGTTCGTGGGGTATAAAACAACGGAAATCACGGTAGGTGATCGGGCAAAGCTCGATATCGTGCTGGAAGTCGATGAAAAATCGCTGGATGAAGTCGTAGTCGTAGGGTATGGTACGGTAAAGAAAAGCGATCTGACCGGCTCGGTGGGTTCCCTGAAGGATAAAGATTTCAACCAGGGCGTGGTGACGACCGTACAGCAGCTCATGCAGGGGAAGCTGGCCGGGGTACAGGTCGTTCAGAATGACGGAAAGCCGGGAGGAGGGATTTCTGTTTCCGTTCGAGGCGTCGGCTCGATCAATTCCGGGACCGGGCCGCTCTATGTGATAGACGGGCTTCCTTCGGAAAACATCAATTTTATCAATCCTTCGGATATCGAATCGATAGAAGTGCTGAAGGACGCGTCCGCAACAGCCATATACGGAGCCAGGGGCGCTAACGGAGTCGTGCTCCTGACTACCAAAAAAGGAGCGGCGGGCAAGCTCCAGGTCAGCTATGACGCGTATGCCGGTACGCAGCGCGTCATCGGGCGCCTCGGGGTTATGAACGCGGAAGAGTACCGGCAAACGGTAAACGATATTATCAGTGCCGGCGGCGGGGCCGAGTCGGAACGGGTCACCGAAATCCATGAAGGCGGCACCGACTGGCAGGGTATGGTATATAACCAGGATGCCGTTATTCACAGCCATAACCTTTCGCTCTCCGGGGGAACCGGCAAAACCCGGTATTTCGTAGGCTTCAATCTGTTCGACCAGGACGGAGTCGTGAAGAACACGGCGTTCCGGCGGTACAGCACGCGTGTCAACCTGGAGCACAAAGCCGATGAAAAGTTCGTAATGGGCCTGAACCTGAGCGCTTCCTATATCCGCGACCGTAACATACCCTCGGGGTTTGCCATCAACGAGAGCGGCGGCGTGCTGTATGCCGCCTATAACTACGATCCGACAGCAGCGCCTTATAAAGAGGACGGGACGTACAACCTTTCCCCTTTTATGACCATGGATAACCCTATGGCATTGGTCTACGGGAAAAATACCTACATCGACCGCTTTAAGACATTCGGGACGTTTTTTGCGGAGTATTTTTTCCTTCCCGAACTTTCATTCAAAGTAAATGTCGGCGGCGATATCAATACGCATACAACAGACAGCTACGTTGACAGGACCACGATAGAAGGCAGGGCCAACGACGGGGTCGGCTCTTTCAATCGCGCTACCAACACGAATTATCTTGCCGAAGGCCTCCTCAATTTCAACCGCAAGGCAGGCATACATGGCTTGAATGCCGTGCTCGGTGTGACTACCCAACGGTTCACTTCAGCGGATGTCAGCGGGACCGGTAGAGGATTTCCAAGCGATATTACGCGTACTTACAATTTCGGCTCCGCCACTCCCACATTGTATACGATGGGAAGCTCAAAGGAGGCCAATAAGCTGCTTTCCTACCTCGGGCGGGTCAATTATTCGCTGCTGGACAAATACCTCCTCACCGCAAGCTTCCGGGCCGACGGGTCGTCGAGGTTCGGGTCGAACAACCGTTTCGGCTATTTCCCGTCATTTGCCGCCGCATGGAAGATAGAAAACGAGACCTTCTTCCATCCGCTGACCGATGCGGTCAACACGCTGAAGCTGCGCGCGAGCTGGGGCAGGACCGGGAACCAGGAAATAAGCAACTACGAAGCGCTGACCACCTTCGGCAACGGCCCCGTAGCCGTATTTGACGACCGGCAAGTCAAAACCTTCCAGCCCACCCGCATCGGGAATCCCAACCTGAAGTGGGAAACCACCGAACAGACAAACATCGGGATCGACTACGGCCTGATCGGCAACCGTATACAGGGAACGATAGATTACTACAAGAAAGTAACGTTCGACATGCTGCTGAACATGCCCATTCCTACAACGACCGGCTATGCATTCCAGAGGCAGAACATCGGGAAAATTCAGAATTCCGGCTGGGAGTTCGGAATTACTTCCTACAACTTAAAGACAAAGGCGCTGGACTGGACGACCCAGGTGACTTTTAATACACTGAAAAACGTCGTGCTCGATCTCGGGGGAGCGCCGCAGATCATCACCGGAAGCGCCGGCTTTTCAAACCAGATAGCCATTATCAGGGAAGGGGCGCCGCTGCGGTCTTTTTACGGCTACCAGGTGGAAGGCATCTGGCAGGAAGGCGACGACCTTTCTCAAACTAAAGACAATGTAGCGCCGGGAGATTTCAGGTATAAGGACGTCGACGGAAACGGTATGGTGAATGCCGATGACCGGCAGATCCTGGGCAACTCCTTCCCGGATATGATCTGGTCTGTCGGGAACACTTTCTCGCTCGGTAATTTCAGCCTGTATGTATTCTTCGAAGGACAAAACGGCGTCAGCATGTTTAACGGCAATATGGCCGAGACCTATTTCCCGATAAGCCTGAGAAGGAACCGCCTGGCGGAGCCGCTGCTCAACCGGTGGACGCCGCAAAACCCATCTTCTATATATCCTTCATTTGTAAATCCCATGGGACAGGGACAGAAATCGGTCAACAGCTATACGGTGGAAGATGCCTCCTATGCGAGGCTGAATACCATGAAGCTGAGCTACCGGCTGCCTTTCAAAGGCAAGGTCTTCAGCGCCGGCACAGTCTTCGTAACCGGCCAGAATCTTTATACCTGGACGCGCTACAAAGGGATAGACCCGGCCGTAAACCCCAACGGGGGCACCAACCTCCGGATAGATTTCAACGTCTACCCGCTCGCCAGGACCTTCATGGCCGGCTTTAATCTTCAGTTATAA
PROTEIN sequence
Length: 1103
MKISALPLFLLGWLASVSAAHPLLSQDLLARRISIKAEKTPLKEVLRQLNRQADIRFSYNSKQIDVDVPVSLVSANEPLGQVLDRLLTPLGIGYTVYSRLVVLKSPDPAKKMTGADADSVVPLPVVQTVTGHVADEKGESLPGVNILLKGTQRGIITDAGGNFSIEVPDADAVLVFSFVGYKTTEITVGDRAKLDIVLEVDEKSLDEVVVVGYGTVKKSDLTGSVGSLKDKDFNQGVVTTVQQLMQGKLAGVQVVQNDGKPGGGISVSVRGVGSINSGTGPLYVIDGLPSENINFINPSDIESIEVLKDASATAIYGARGANGVVLLTTKKGAAGKLQVSYDAYAGTQRVIGRLGVMNAEEYRQTVNDIISAGGGAESERVTEIHEGGTDWQGMVYNQDAVIHSHNLSLSGGTGKTRYFVGFNLFDQDGVVKNTAFRRYSTRVNLEHKADEKFVMGLNLSASYIRDRNIPSGFAINESGGVLYAAYNYDPTAAPYKEDGTYNLSPFMTMDNPMALVYGKNTYIDRFKTFGTFFAEYFFLPELSFKVNVGGDINTHTTDSYVDRTTIEGRANDGVGSFNRATNTNYLAEGLLNFNRKAGIHGLNAVLGVTTQRFTSADVSGTGRGFPSDITRTYNFGSATPTLYTMGSSKEANKLLSYLGRVNYSLLDKYLLTASFRADGSSRFGSNNRFGYFPSFAAAWKIENETFFHPLTDAVNTLKLRASWGRTGNQEISNYEALTTFGNGPVAVFDDRQVKTFQPTRIGNPNLKWETTEQTNIGIDYGLIGNRIQGTIDYYKKVTFDMLLNMPIPTTTGYAFQRQNIGKIQNSGWEFGITSYNLKTKALDWTTQVTFNTLKNVVLDLGGAPQIITGSAGFSNQIAIIREGAPLRSFYGYQVEGIWQEGDDLSQTKDNVAPGDFRYKDVDGNGMVNADDRQILGNSFPDMIWSVGNTFSLGNFSLYVFFEGQNGVSMFNGNMAETYFPISLRRNRLAEPLLNRWTPQNPSSIYPSFVNPMGQGQKSVNSYTVEDASYARLNTMKLSYRLPFKGKVFSAGTVFVTGQNLYTWTRYKGIDPAVNPNGGTNLRIDFNVYPLARTFMAGFNLQL*