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cn_combo_scaffold_1770_8

Organism: CN-SCN_Cytophagaceae_12x

partial RP 39 / 55 BSCG 38 / 51 ASCG 12 / 38
Location: comp(6840..7793)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EB10_RUNSL similarity UNIREF
DB: UNIREF100
  • Identity: 32.3
  • Coverage: 337.0
  • Bit_score: 129
  • Evalue 5.80e-27
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 32.3
  • Coverage: 337.0
  • Bit_score: 129
  • Evalue 1.60e-27
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACT92462.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermenta similarity UNIPROT
DB: UniProtKB
  • Identity: 40.5
  • Coverage: 185.0
  • Bit_score: 109
  • Evalue 8.70e-21

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Taxonomy

Dyadobacter fermentans → Dyadobacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 954
ATGGATTATTTCAGAAAAATAATAACTTTTGCACAGTTGTTTTTCACAATATCCTTTTTTTTGGCGAGTTTAGTCATAATGAGCACCGTAAGTGAAAATATCAGGTATTTAAGGAAGCTGAAAGGTTATACCCAGGAACAATTCGCCGAGCAGATAGGGATCAAGCGCTCCCTGCTCGGAGCCTATGAGGAGGCGCGAGCAAATCCCAATGAAATTTACCTGGATAGCATGGCGGAAGTGCTGGGGGTATCTGTTGAAAATCTTCTGAACGATGACCTGAAGGAGCGGGTACGAAAGCTGGGGACGGGGAATATTTTGAAACTTAATCCGGACAGGACAGAGCCGGCTGCTTCCTCGCCGGTCCCGGTTGCAGACAGGGAACCTATGGAAAGACCATTGTCAGATCAAACAAGCCGGGCGGAGGAAGAACCTGTAGAAGGCGCCCAGATGGACCTGTTTGCCGGTGCCGGCAGTCCCGGTGCGGCTCCTGTAGCGAAGCCAGCCTATAGCGCCATGCCGGCAGCGGCCGTTCCGCCGGTAACCGCCCCGGCCAGCGCCGAAGGCTATGTTGAATCGCTCAGGTCGTTGCTGGAGTCCCACGGAGGGACCAGGTTATTTTCCGACCTGGAAGATATACCGCTGCGCGGCGTGCACCTCATCGGGGCGCGGCTGGACAGGACAAATCTCATAGAAAATAATGCACTGTATATCCTGATGACTTCCGACGGCCAGGTGCTGTTCAGGAGGGCATTCAACCAGATCGCTATAAAGGGGACCGTTATCCTTAGCTCCGATTTCCCGGATAAGCCGACAAAGGAGCTGCCTGAATCGTCTATCAGCGAAGTCTACAGGTATATAGCTACCGTGCAGACCGACGCCCCTTCGGCGGTAGTGCCCGTCAGGAAGCTGAAAGAGCTTACGAACGAGATGGCCAGGCTCCTCGATAACGCCTAG
PROTEIN sequence
Length: 318
MDYFRKIITFAQLFFTISFFLASLVIMSTVSENIRYLRKLKGYTQEQFAEQIGIKRSLLGAYEEARANPNEIYLDSMAEVLGVSVENLLNDDLKERVRKLGTGNILKLNPDRTEPAASSPVPVADREPMERPLSDQTSRAEEEPVEGAQMDLFAGAGSPGAAPVAKPAYSAMPAAAVPPVTAPASAEGYVESLRSLLESHGGTRLFSDLEDIPLRGVHLIGARLDRTNLIENNALYILMTSDGQVLFRRAFNQIAIKGTVILSSDFPDKPTKELPESSISEVYRYIATVQTDAPSAVVPVRKLKELTNEMARLLDNA*